RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CCDC94Q9BW85 323 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 NCOA5Q9HCD5 579 aaKnown RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 TOPORSQ9NS56 1045 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 GCNT4Q9P109 453 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 CALCOCO1Q9P1Z2 691 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZMYM5Q9UJ78 669 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 ITPR2Q14571 2701 aa9.62□□□□□ -0.87
TRAPPC9-212ENST00000521944 E9PAM4 449 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 CILPO75339 1184 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZNF883P0CG24 379 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 HLA-EP13747 358 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 TYMPP19971 482 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 ATP2B1P20020 1258 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 DDX6P26196 483 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 LRPAP1P30533 357 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 SOX11P35716 441 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 NAMPTP43490 491 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 TUFMP49411 452 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 GPR15P49685 360 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 CSRP3P50461 194 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 GUCY2FP51841 1108 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 YARSP54577 528 aaKnown RBP9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 SEMG2Q02383 582 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 SPAG1Q07617 926 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 DMP1Q13316 513 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 MGAT5BQ3V5L5 792 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 SLC39A12Q504Y0 691 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 SEZ6Q53EL9 994 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 OVOS1Q6IE37 1185 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 DHRS13Q6UX07 377 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 SLC36A4Q6YBV0 504 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 MIB1Q86YT6 1006 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 MCPH1Q8NEM0 835 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 WBP1Q96G27 269 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZBTB45Q96K62 511 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 GCNAQ96QF7 691 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 PI4K2AQ9BTU6 479 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZCWPW1Q9H0M4 648 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
TRAPPC9-212ENST00000521944 A0A1W2PQF6 199 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 CCNT1O60563 726 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 KAT7O95251 611 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 CYP17A1P05093 508 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 HAPLN1P10915 354 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 C6P13671 934 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 CYP11B2P19099 503 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 IFNAR2P48551 515 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 RAB15P59190 212 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 CXADRP78310 365 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 HLA-BQ31612 363 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 EOGTQ5NDL2 527 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 SDHAF4Q5VUM1 108 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 MRPL14Q6P1L8 145 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 LRRC69Q6ZNQ3 347 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 NEK8Q86SG6 692 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 USP37Q86T82 979 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 ADGRG2Q8IZP9 1017 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 PGBD3Q8N328 593 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 TTC16Q8NEE8 873 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 DEPTORQ8TB45 409 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 SH3RF2Q8TEC5 729 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 DNASE2BQ8WZ79 361 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 BRF1Q92994 677 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 CDC6Q99741 560 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 TARS2Q9BW92 718 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZDHHC5Q9C0B5 715 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 FAM124BQ9H5Z6 455 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 GAREM1Q9H706 876 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 TM7SF3Q9NS93 570 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 GMPR2Q9P2T1 348 aaKnown RBP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 KCNJ14Q9UNX9 436 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 TSC2P49815 1807 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 BSNQ9UPA5 3926 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 ANAPC1Q9H1A4 1944 aa9.6□□□□□ -0.87
TRAPPC9-212ENST00000521944 SPTBN1Q01082 2364 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 C2orf78A6NCI8 922 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 SLC28A2O43868 658 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 NTRK1P04629 796 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 GCFC2P16383 781 aaKnown RBP9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 EFNA5P52803 228 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 VEPH1Q14D04 833 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 ZNF568Q3ZCX4 644 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 HSF5Q4G112 596 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 TAF1BQ53T94 588 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 RHBDF2Q6PJF5 856 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 Q6ZUG5 572 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 CATSPER3Q86XQ3 398 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 ARL14EPQ8N8R7 260 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 C1orf216Q8TAB5 229 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 TTC9Q92623 222 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 ERLEC1Q96DZ1 483 aa9.59□□□□□ -0.87
TRAPPC9-212ENST00000521944 YTHDC1Q96MU7 727 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms