RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 CRYBG2Q8N1P7 616 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 UBR7Q8N806 425 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 ZNF461Q8TAF7 563 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 AUTS2Q8WXX7 1259 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 MRPL45Q9BRJ2 306 aaKnown RBP8.9□□□□□ -0.98
VPS13B-210ENST00000521932 ZCWPW1Q9H0M4 648 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 SUV39H2Q9H5I1 410 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 SMYD3Q9H7B4 428 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 AVENQ9NQS1 362 aaPredicted RBP8.9□□□□□ -0.98
VPS13B-210ENST00000521932 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.98
VPS13B-210ENST00000521932 DDX43Q9NXZ2 648 aaKnown RBP8.9□□□□□ -0.98
VPS13B-210ENST00000521932 CDH9Q9ULB4 789 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 MAFFQ9ULX9 164 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 BARX2Q9UMQ3 279 aaPredicted RBP8.9□□□□□ -0.98
VPS13B-210ENST00000521932 SIK3Q9Y2K2 1263 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 DAAM1Q9Y4D1 1078 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 NME7Q9Y5B8 376 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 CDY1Q9Y6F8 540 aa8.9□□□□□ -0.98
VPS13B-210ENST00000521932 VWA8A3KMH1 1905 aa8.9□□□□□ -0.99
VPS13B-210ENST00000521932 REV3LO60673 3130 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 FSD2A1L4K1 749 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 A8MXQ7 604 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PER2O15055 1255 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 ADAM12O43184 909 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 NCK2O43639 380 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 CLASP2O75122 1294 aaKnown RBP8.89□□□□□ -0.99
VPS13B-210ENST00000521932 CILPO75339 1184 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 NOL4O94818 638 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 ATF2P15336 505 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 UCHL3P15374 230 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 RPL17P18621 184 aaKnown RBP8.89□□□□□ -0.99
VPS13B-210ENST00000521932 ACO1P21399 889 aaKnown RBP8.89□□□□□ -0.99
VPS13B-210ENST00000521932 IGFBP4P22692 258 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 KLRC2P26717 231 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PCSK1P29120 753 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PBX1P40424 430 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 CLCN4P51793 760 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 NDST1P52848 882 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 HYAL1Q12794 435 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 LRMPQ12912 555 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 COL19A1Q14993 1142 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 SUZ12Q15022 739 aaKnown RBP8.89□□□□□ -0.99
VPS13B-210ENST00000521932 DUSP6Q16828 381 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 UVSSAQ2YD98 709 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 TPGS2Q68CL5 300 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 RTL10Q7L3V2 364 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 RRAGAQ7L523 313 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 LRRTM3Q86VH5 581 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 ARHGEF19Q8IW93 802 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PPM1KQ8N3J5 372 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 OR6B3Q8NGW1 331 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 OR10T2Q8NGX3 314 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 SLC22A17Q8WUG5 538 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 HDAC7Q8WUI4 952 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 MYLIPQ8WY64 445 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PPP2R3CQ969Q6 453 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 KREMEN1Q96MU8 473 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 PKMYT1Q99640 499 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 NAA15Q9BXJ9 866 aaKnown RBP8.89□□□□□ -0.99
VPS13B-210ENST00000521932 SNX25Q9H3E2 840 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 TLE6Q9H808 572 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 UBE2TQ9NPD8 197 aaPredicted RBP8.89□□□□□ -0.99
VPS13B-210ENST00000521932 CISHQ9NSE2 258 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 HSFX1Q9UBD0 423 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 CNTN6Q9UQ52 1028 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 XIRP2A4UGR9 3374 aa8.89□□□□□ -0.99
VPS13B-210ENST00000521932 COL4A4P53420 1690 aaPredicted RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 WDR27A2RRH5 827 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 SOWAHDA6NJG2 315 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 TGM5O43548 720 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 PAPLNO95428 1278 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 PDGFRBP09619 1106 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 PTPN1P18031 435 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 AMPD1P23109 780 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 RAP1GAPP47736 663 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 NRIP1P48552 1158 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 MFAP3P55082 362 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 YWHAEP62258 255 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 ROR1Q01973 937 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 APBA1Q02410 837 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 ADAM15Q13444 863 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 SYCP1Q15431 976 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 MAPRE1Q15691 268 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 TCEAL5Q5H9L2 206 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 GJB7Q6PEY0 223 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 SCARA5Q6ZMJ2 495 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 SYT9Q86SS6 491 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 RBM23Q86U06 439 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 DCP1BQ8IZD4 617 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 EFHBQ8N7U6 833 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 MYCBPAPQ8TBZ2 947 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 C2orf15Q8WU43 125 aaKnown RBP8.88□□□□□ -0.99
VPS13B-210ENST00000521932 KAT5Q92993 513 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 TMEM176AQ96HP8 235 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 TNIP3Q96KP6 325 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 TMEM209Q96SK2 561 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 HINFPQ9BQA5 517 aa8.88□□□□□ -0.99
VPS13B-210ENST00000521932 SYT15Q9BQS2 421 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms