RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RIN2Q8WYP3 895 aaPredicted RBP16.8■□□□□ 0.28
USP42-207ENST00000521713 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 TSC22D4Q9Y3Q8 395 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 SLIT3O75094 1523 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 SGPL1O95470 568 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 RNF135Q8IUD6 432 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
USP42-207ENST00000521713 O00370 1275 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 KRT75O95678 551 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 BST2Q10589 180 aaKnown RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 PDK2Q15119 407 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 SYTL3Q4VX76 610 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 PTPRN2Q92932 1015 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 CDK5RAP1Q96SZ6 601 aaKnown RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 APBA2Q99767 749 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 SLC13A1Q9BZW2 595 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 CD248Q9HCU0 757 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 XPO7Q9UIA9 1087 aaKnown RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 EIF4E1BA6NMX2 242 aaKnown RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 SMTNL2Q2TAL5 461 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 MIB1Q86YT6 1006 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 BRSK2Q8IWQ3 736 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 ARHGEF38Q9NXL2 777 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 NEU2Q9Y3R4 380 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 NR2E3Q9Y5X4 410 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 FKTNO75072 461 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 ACBD5Q5T8D3 534 aaPredicted RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 ANGPTL8Q6UXH0 198 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 LINC00523Q86TU6 105 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 C16orf89Q6UX73 402 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 DNAJC7Q99615 494 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 THAP2Q9H0W7 228 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 GID8Q9NWU2 228 aa16.79■□□□□ 0.28
USP42-207ENST00000521713 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
USP42-207ENST00000521713 ZNF185O15231 689 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 CSDE1O75534 798 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 PYGLP06737 847 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 NQO1P15559 274 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 PRLRP16471 622 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 SOX10P56693 466 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 POLD3Q15054 466 aaPredicted RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 WNK4Q96J92 1243 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 CNPY3Q9BT09 278 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 PSMC3IPQ9P2W1 217 aaPredicted RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 UBIAD1Q9Y5Z9 338 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 NFASCO94856 1347 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 KITP10721 976 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 FGFR4P22455 802 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 MTA1Q13330 715 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 PDAP1Q13442 181 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP42-207ENST00000521713 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 SETD3Q86TU7 594 aaPredicted RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 CINPQ9BW66 212 aaPredicted RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 GPR63Q9BZJ6 419 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 TLR2O60603 784 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 POLBP06746 335 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 ANKMY2Q8IV38 441 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 TTC30BQ8N4P2 665 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 TRAPPC12Q8WVT3 735 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 POP1Q99575 1024 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 RBM12Q9NTZ6 932 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 RRN3Q9NYV6 651 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 A0A087X0T9 212 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 FAM228BP0C875 321 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 AVPR1AP37288 418 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 SEC24CP53992 1094 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 NOA1Q8NC60 698 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 DTX3LQ8TDB6 740 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 TFB1MQ8WVM0 346 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 CCDC90BQ9GZT6 254 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 DDX43Q9NXZ2 648 aaKnown RBP16.78■□□□□ 0.28
USP42-207ENST00000521713 TEKT2Q9UIF3 430 aa16.78■□□□□ 0.28
USP42-207ENST00000521713 EML1O00423 815 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 ZNF263O14978 683 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 POMCP01189 267 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 AMPD2Q01433 879 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 TRADDQ15628 312 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 KYNUQ16719 465 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 MFN1Q8IWA4 741 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 IPMKQ8NFU5 416 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 MS4A14Q96JA4 679 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 FBXO44Q9H4M3 255 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 TMEM134Q9H6X4 195 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 PTGER2P43116 358 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 RGS4P49798 205 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 CYTH1Q15438 398 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.28
USP42-207ENST00000521713 JAMLQ86YT9 394 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 TPCN2Q8NHX9 752 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 PORCNQ9H237 461 aa16.77■□□□□ 0.28
USP42-207ENST00000521713 EML4Q9HC35 981 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms