RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CNPP09543 421 aaKnown RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 SRGAP2BP0DMP2 458 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 CTSAP10619 480 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 CD247P20963 164 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 CSRP1P21291 193 aaKnown RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 GUCY2CP25092 1073 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 THBS2P35442 1172 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 SOX5P35711 763 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 FNTBP49356 437 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 CDKN1CP49918 316 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 FAM193AP78312 1265 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 SCAPQ12770 1279 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 SMC1AQ14683 1233 aaKnown RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PPP2R5EQ16537 467 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 TMEM266Q2M3C6 531 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 IL31Q6EBC2 164 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 MRM1Q6IN84 353 aaKnown RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 KIAA1211LQ6NV74 962 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 C6orf15Q6UXA7 325 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 LIMS2Q7Z4I7 341 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 THNSL1Q8IYQ7 743 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 RNF168Q8IYW5 571 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF513Q8N8E2 541 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 NETO2Q8NC67 525 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 DNAJB3Q8WWF6 145 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 SECISBP2LQ93073 1101 aaKnown RBP4.41□□□□□ -1.7
VPS13B-208ENST00000521037 ZBTB8AQ96BR9 441 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PCYT2Q99447 389 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PLA2G2FQ9BZM2 168 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 ARRDC1-AS1Q9H2J1 176 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 SFXN1Q9H9B4 322 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 ENTPD7Q9NQZ7 604 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 RGS18Q9NS28 235 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 PFDN2Q9UHV9 154 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 MCM8Q9UJA3 840 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF451Q9Y4E5 1061 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 APC2O95996 2303 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 CLUHO75153 1309 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 WDR19Q8NEZ3 1342 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 KDM3AQ9Y4C1 1321 aa4.41□□□□□ -1.7
VPS13B-208ENST00000521037 MYH15Q9Y2K3 1946 aa4.4□□□□□ -1.7
VPS13B-208ENST00000521037 ITPR2Q14571 2701 aa4.4□□□□□ -1.7
VPS13B-208ENST00000521037 AKAP9Q99996 3911 aa4.4□□□□□ -1.7
VPS13B-208ENST00000521037 NOTCH4Q99466 2003 aa4.4□□□□□ -1.7
VPS13B-208ENST00000521037 A0A1W2PQH9 124 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 B2RBV5 119 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 NT5C1B-RDH14C9J2C7 533 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 PEX14O75381 377 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 CXCL14O95715 111 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SNHG28P0DPA3 235 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 CHRNB1P11230 501 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 CEACAM1P13688 526 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 LAG3P18627 525 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SLC1A4P43007 532 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 GDF5P43026 501 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 MAGEA9P43362 315 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 MRPS6P82932 125 aaKnown RBP4.4□□□□□ -1.71
VPS13B-208ENST00000521037 MRPS9P82933 396 aaKnown RBP4.4□□□□□ -1.71
VPS13B-208ENST00000521037 G3BP1Q13283 466 aaKnown RBP eCLIP4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SIM2Q14190 667 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-208ENST00000521037 UBXN2BQ14CS0 331 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 NCAPHQ15003 741 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SLC35G1Q2M3R5 365 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 FAM26FQ5R3K3 315 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 RSPO2Q6UXX9 243 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-208ENST00000521037 PIP4P1Q86T03 277 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 TMC8Q8IU68 726 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SMC5Q8IY18 1101 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 LGI4Q8N135 537 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 LRIG1Q96JA1 1093 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SPATA33Q96N06 139 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 KLHL5Q96PQ7 755 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 IWS1Q96ST2 819 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 PDCD2LQ9BRP1 358 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 ZNF747Q9BV97 191 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 CPVLQ9H3G5 476 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SLITRK6Q9H5Y7 841 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 CAAP1Q9H8G2 361 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 PXMP2Q9NR77 195 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 SPG21Q9NZD8 308 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 PPP4R1LQ9P1A2 415 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 GABBR1Q9UBS5 961 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 TCEAL9Q9UHQ7 104 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 NOC2LQ9Y3T9 749 aaKnown RBP4.4□□□□□ -1.71
VPS13B-208ENST00000521037 ASXL3Q9C0F0 2248 aa4.4□□□□□ -1.71
VPS13B-208ENST00000521037 KIF26AQ9ULI4 1882 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ABCA12Q86UK0 2595 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 A0A087WV48 116 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 A0A087X0B3 334 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 GSTTP1A0A1W2PQM5 241 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 LNP1A1A4G5 178 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 MROH6A6NGR9 719 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 C4orf47A7E2U8 309 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 J3QKU1 62 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ARNTLO00327 626 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 CENPBP07199 599 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 STAG3L1P0CL83 205 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 FCARP24071 287 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 HOXA6P31267 233 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms