RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 HAPLN1P10915 354 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 ELF1P32519 619 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 SCNN1AP37088 669 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 PBX2P40425 430 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 RPL34P49207 117 aaKnown RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 TUFMP49411 452 aaKnown RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 RGS19P49795 217 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 SLC5A3P53794 718 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 HADHBP55084 474 aaKnown RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 ADCY1Q08828 1119 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 GPM6BQ13491 265 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 RAB33AQ14088 237 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 ZNF569Q5MCW4 686 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 PDE12Q6L8Q7 609 aaKnown RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 C11orf63Q6NUN7 778 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 LLGL2Q6P1M3 1020 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 OLFML1Q6UWY5 402 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 NYAP1Q6ZVC0 841 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 FAM183BPQ6ZVS7 135 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 SYCE1Q8N0S2 351 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 TPCN2Q8NHX9 752 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 FEZF2Q8TBJ5 459 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 SPPL3Q8TCT6 385 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 GOLGA1Q92805 767 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 MCRS1Q96EZ8 462 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 KCNK16Q96T55 309 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 NGRNQ9NPE2 291 aaKnown RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 CNGB3Q9NQW8 809 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 HSFX1Q9UBD0 423 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 CHORDC1Q9UHD1 332 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-208ENST00000520561 ANAPC7Q9UJX3 599 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 MAFFQ9ULX9 164 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
CSMD1-208ENST00000520561 TCRBV5S1A1TA0A578 114 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 GRID2IPA4D2P6 1211 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TMEM110-MUSTN1A8MSY1 372 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 HHLA1C9JL84 531 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 H3BNC9 293 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 MYO1FO00160 1098 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 PRRG1O14668 218 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 GRM6O15303 877 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 PAPSS1O43252 624 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 LILRB3O75022 631 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 HSF2BPO75031 334 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 PALMO75781 387 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 CXCL14O95715 111 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 ABL1P00519 1130 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 CNPP09543 421 aaKnown RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 KRT3P12035 628 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TNNT1P13805 278 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 KLRC2P26717 231 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TKTL1P51854 596 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 ETF1P62495 437 aaKnown RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 MRPS5P82675 430 aaKnown RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 SLC6A3Q01959 620 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 DUSP4Q13115 394 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 PLD1Q13393 1074 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 VEPH1Q14D04 833 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 RAB41Q5JT25 222 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 EFHC1Q5JVL4 640 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 SLC26A9Q7LBE3 791 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 GPRIN1Q7Z2K8 1008 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 SPRED2Q7Z698 418 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 DAAM2Q86T65 1068 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 SLC35F6Q8N357 371 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TTC9BQ8N6N2 239 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 ZNF461Q8TAF7 563 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 MICAL1Q8TDZ2 1067 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 ARNTL2Q8WYA1 636 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 IRGQQ8WZA9 623 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 FAM149B1Q96BN6 582 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 CEP295NLQ96MC4 621 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 KLHL5Q96PQ7 755 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TRIM62Q9BVG3 475 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-208ENST00000520561 ULBP1Q9BZM6 244 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 CYP4F11Q9HBI6 524 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 TMEM30AQ9NV96 361 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 ASNSD1Q9NWL6 643 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 IP6K2Q9UHH9 426 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 SALL4Q9UJQ4 1053 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 COG5Q9UP83 839 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 YIPF1Q9Y548 306 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 IRAK3Q9Y616 596 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 MYH10P35580 1976 aa9.41□□□□□ -0.9
CSMD1-208ENST00000520561 COL4A4P53420 1690 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-208ENST00000520561 CTAGE9A4FU28 777 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SIGLEC16A6NMB1 481 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 FSCN2O14926 492 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-208ENST00000520561 DAB1O75553 588 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms