RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TMEM150AQ86TG1 271 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 CCDC65Q8IXS2 484 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 KIAA2013Q8IYS2 634 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 CSGALNACT2Q8N6G5 542 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 LRRC52Q8N7C0 313 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 PDILTQ8N807 584 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 GLIS3Q8NEA6 775 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 CSGALNACT1Q8TDX6 532 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 CACTINQ8WUQ7 758 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 RMDN1Q96DB5 314 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF560Q96MR9 790 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 PKMYT1Q99640 499 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 ACBD6Q9BR61 282 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 FAM126AQ9BYI3 521 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 EPC1Q9H2F5 836 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 PCIF1Q9H4Z3 704 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 PDE11AQ9HCR9 933 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 KBTBD4Q9NVX7 518 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 GDAP2Q9NXN4 497 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 ABI2Q9NYB9 513 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 SIX4Q9UIU6 781 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 L1RE1Q9UN81 338 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 DYRK1BQ9Y463 629 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 PCDHB5Q9Y5E4 795 aa9.96□□□□□ -0.82
CTNNA1-221ENST00000520339 SLC38A8A6NNN8 435 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 GABRDO14764 452 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 KIAA0391O15091 583 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 SPTLC2O15270 562 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 HUS1O60921 280 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 PPP6R2O75170 966 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 ITGB3P05106 788 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 GPR15P49685 360 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 CCR3P51677 355 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 NLRP12P59046 1061 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 TSPY1Q01534 308 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 NFE2Q16621 373 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 CNNM4Q6P4Q7 775 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 ERMP1Q7Z2K6 904 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 LIMS2Q7Z4I7 341 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 OSTM1Q86WC4 334 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 RALGPS2Q86X27 583 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 TMEM86AQ8N2M4 240 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 PGBD3Q8N328 593 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 SPATA18Q8TC71 538 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 BPIFB1Q8TDL5 484 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 LEO1Q8WVC0 666 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 HPS3Q969F9 1004 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 ZFYVE19Q96K21 471 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 CEP63Q96MT8 703 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 PI4K2AQ9BTU6 479 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 TRIM9Q9C026 710 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 SMG9Q9H0W8 520 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 TNMDQ9H2S6 317 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 GTSE1Q9NYZ3 720 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 ITGA11Q9UKX5 1188 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 SPTBN4Q9H254 2564 aa9.95□□□□□ -0.82
CTNNA1-221ENST00000520339 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 TRIP11Q15643 1979 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF233A6NK53 670 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SOBPA7XYQ1 873 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SPECC1L-ADORA2AF8WAN1 911 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 MAN1A2O60476 641 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 PRPF40AO75400 957 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 CSH1P0DML2 217 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 CSH2P0DML3 217 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 ACAT1P24752 427 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 DDX6P26196 483 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 CXCL12P48061 93 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SATB1Q01826 763 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 TNK2Q07912 1038 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 BFSP1Q12934 665 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 LRRC32Q14392 662 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 BECN1Q14457 450 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 TAF12Q16514 161 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 DDR2Q16832 855 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SOWAHAQ2M3V2 549 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 GLIPR1L2Q4G1C9 344 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SDHAF4Q5VUM1 108 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 FAM171BQ6P995 826 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SHC4Q6S5L8 630 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 MON1AQ86VX9 555 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 CMTM8Q8IZV2 173 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 GPD1LQ8N335 351 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SPEM1Q8N4L4 309 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 TOP6BLQ8N6T0 577 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 CELF5Q8N6W0 485 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 OR5B17Q8NGF7 314 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 TTC8Q8TAM2 541 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF507Q8TCN5 953 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 USP13Q92995 863 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 SNX21Q969T3 373 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 ZNF396Q96N95 335 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 GCNAQ96QF7 691 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 C7orf25Q9BPX7 421 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 FAM83CQ9BQN1 747 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 MTMR12Q9C0I1 747 aa9.94□□□□□ -0.82
CTNNA1-221ENST00000520339 LRRC27Q9C0I9 530 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms