RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FCRL6Q6DN72 434 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 USP17L6PQ6QN14 398 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 SRLQ86TD4 932 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 LIX1LQ8IVB5 337 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 ABRAQ8N0Z2 381 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 VGLL2Q8N8G2 317 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 DEPTORQ8TB45 409 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 ACTRT2Q8TDY3 377 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 ATG4AQ8WYN0 398 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 PDLIM2Q96JY6 352 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 TTPALQ9BTX7 342 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 SLC52A1Q9NWF4 448 aa3.95□□□□□ -1.78
HMGB1P41-201ENST00000520234 CCDC88BA6NC98 1476 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ADM5C9JUS6 153 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 CD3EAPO15446 510 aaKnown RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 RGS10O43665 173 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 PIAS2O75928 621 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 CHRM2P08172 466 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 MYL4P12829 197 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 IDEP14735 1019 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZFXP17010 805 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 EPHA3P29320 983 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ADRA1BP35368 520 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ALDH9A1P49189 494 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF169Q14929 603 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ARL13BQ3SXY8 428 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 KLHDC7AQ5VTJ3 777 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 CACHD1Q5VU97 1274 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 HIBCHQ6NVY1 386 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 TOGARAM2Q6ZUX3 1019 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF551Q7Z340 670 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 IZUMO1Q8IYV9 350 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 FANCBQ8NB91 859 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 CCDC150Q8NCX0 1101 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 RFKQ969G6 155 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 RSPRY1Q96DX4 576 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 SGCZQ96LD1 299 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 MAGEB5Q9BZ81 275 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 GLOD4Q9HC38 313 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 HEYLQ9NQ87 328 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 TBC1D23Q9NUY8 699 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 TBC1D30Q9Y2I9 924 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 TOP2AP11388 1531 aaKnown RBP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 WRNQ14191 1432 aaPredicted RBP eCLIP3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 EEA1Q15075 1411 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 WIZO95785 1651 aa3.94□□□□□ -1.78
HMGB1P41-201ENST00000520234 A1L4Q6 167 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 GCOM1H8Y6P7 765 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 INO80B-WBP1J3KQ70 363 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 HNRNPDLO14979 420 aaKnown RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 KCNQ3O43525 872 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 SRGAP2O75044 1071 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 URI1O94763 535 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 PRKCBP05771 671 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 RHOP08100 348 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 GRIA3P42263 894 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 RARRES1P49788 294 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 COPAP53621 1224 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 RHBDL3P58872 404 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 FSTL1Q12841 308 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 OS9Q13438 667 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 MORC3Q14149 939 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 PTCHD3Q3KNS1 767 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 DEPDC1Q5TB30 811 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 MAVSQ7Z434 540 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 GRASPQ7Z6J2 395 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 MORC1Q86VD1 984 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 KRT73Q86Y46 540 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 TXLNBQ8N3L3 684 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 DNAJB14Q8TBM8 379 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF384Q8TF68 577 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 SOCS4Q8WXH5 440 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 TFAP2BQ92481 460 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 GLG1Q92896 1179 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZDHHC12Q96GR4 267 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 SLC39A13Q96H72 371 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 SELENOOQ9BVL4 669 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 INO80BQ9C086 356 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 CERS4Q9HA82 394 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 GBA2Q9HCG7 927 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZBTB26Q9HCK0 441 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 ARFGAP3Q9NP61 516 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 TRIM36Q9NQ86 728 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 SERTAD4Q9NUC0 356 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 FOXJ2Q9P0K8 574 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 USP22Q9UPT9 525 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 CEP83Q9Y592 693 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 SNX14Q9Y5W7 946 aa3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 EIF4G1Q04637 1599 aaKnown RBP3.93□□□□□ -1.78
HMGB1P41-201ENST00000520234 TNIKQ9UKE5 1360 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 VWC2LB2RUY7 222 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 NCK2O43639 380 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 TTLL1O95922 423 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 PDHA1P08559 390 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 IL6RP08887 468 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 DLDP09622 509 aaKnown RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 SETSIPP0DME0 302 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 NR2F6P10588 404 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 HARSP12081 509 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms