RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DDX6P26196 483 aaKnown RBP eCLIP14.1□□□□□ -0.152e-7■■□□□ 12.2
VEGFA-219ENST00000518824 AVPR1AP37288 418 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 APBA1Q02410 837 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 PRKCQQ04759 706 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 HSP90AA4PQ58FG1 418 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 YAF2Q8IY57 180 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 ZNF687Q8N1G0 1237 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 DTWD2Q8NBA8 298 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 FBXO32Q969P5 355 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 E2F7Q96AV8 911 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 CHFRQ96EP1 664 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 CNOT6LQ96LI5 555 aaKnown RBP14.1□□□□□ -0.15
VEGFA-219ENST00000518824 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
VEGFA-219ENST00000518824 OBP2AQ9NY56 170 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 TRPM5Q9NZQ8 1165 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 GMIPQ9P107 970 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 NDRG2Q9UN36 371 aaKnown RBP14.1□□□□□ -0.15
VEGFA-219ENST00000518824 SIT1Q9Y3P8 196 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 PIAS3Q9Y6X2 628 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 ATP8B3O60423 1300 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 F5P12259 2224 aa14.1□□□□□ -0.15
VEGFA-219ENST00000518824 TRAV19A0A0A6YYK7 116 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 FAM170BA6NMN3 283 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 TULP2O00295 520 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 OAS1P00973 400 aaKnown RBP14.09□□□□□ -0.15
VEGFA-219ENST00000518824 CKMP06732 381 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 FAM200BP0CF97 657 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 HDCP19113 662 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 ACO1P21399 889 aaKnown RBP14.09□□□□□ -0.15
VEGFA-219ENST00000518824 RFX1P22670 979 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 YWHAQP27348 245 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 NHLH1Q02575 133 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 USP4Q13107 963 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 ZNF77Q15935 545 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-219ENST00000518824 RRAGAQ7L523 313 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 TTC30AQ86WT1 665 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 MLKLQ8NB16 471 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 SH3RF2Q8TEC5 729 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 WBP2Q969T9 261 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 TMEM176AQ96HP8 235 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 KREMEN1Q96MU8 473 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 GBP4Q96PP9 640 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 FAM83CQ9BQN1 747 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 ZSWIM1Q9BR11 485 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 EBF3Q9H4W6 596 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 TRPV5Q9NQA5 729 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 OSER1Q9NX31 292 aa14.09□□□□□ -0.15
VEGFA-219ENST00000518824 FAM92AA1XBS5 289 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 PMM2O15305 246 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 AFPP02771 609 aaKnown RBP14.08□□□□□ -0.16
VEGFA-219ENST00000518824 USP17L7P0C7H9 530 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 ZNF268Q14587 947 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-219ENST00000518824 MTF1Q14872 753 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 EHBP1Q8NDI1 1231 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 SHDQ96IW2 340 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 NT5C1BQ96P26 610 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 CRACR2AQ9BSW2 395 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 DUSP16Q9BY84 665 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 CCSER2Q9H7U1 834 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 NMUR1Q9HB89 426 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 SMPD4Q9NXE4 827 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.161e-11■□□□□ 9.4
VEGFA-219ENST00000518824 WNT6Q9Y6F9 365 aa14.08□□□□□ -0.16
VEGFA-219ENST00000518824 CACNA1IQ9P0X4 2223 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 CYP26A1O43174 497 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 COCHO43405 550 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 RTN3O95197 1032 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 GNA14O95837 355 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 OLFM2O95897 454 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 ZDHHC11BP0C7U3 371 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 PLA2G5P39877 138 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 ARHGAP17Q68EM7 881 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 RBM43Q6ZSC3 357 aaKnown RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 PPM1KQ8N3J5 372 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 CSGALNACT1Q8TDX6 532 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 FAM3CQ92520 227 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 NDRG1Q92597 394 aaKnown RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 FAXDC2Q96IV6 333 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 SLITRK1Q96PX8 696 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 INTS2Q9H0H0 1204 aaKnown RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 SAMSN1Q9NSI8 373 aaKnown RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 RBM12Q9NTZ6 932 aaKnown RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 ZMYM5Q9UJ78 669 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 AJAP1Q9UKB5 411 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 NUDT5Q9UKK9 219 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 ARHGAP26Q9UNA1 814 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-219ENST00000518824 CPQQ9Y646 472 aa14.07□□□□□ -0.16
VEGFA-219ENST00000518824 SOBPA7XYQ1 873 aa14.06□□□□□ -0.16
VEGFA-219ENST00000518824 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
VEGFA-219ENST00000518824 LEFTY2O00292 366 aa14.06□□□□□ -0.16
VEGFA-219ENST00000518824 P4HA2O15460 535 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms