RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 SCYL2Q6P3W7 929 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 DRICH1Q6PGQ1 229 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-204ENST00000517824 CXorf38Q8TB03 319 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPIDR-204ENST00000517824 CYTH4Q9UIA0 394 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
SPIDR-204ENST00000517824 SMIM28A0A1B0GU29 152 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 DPYSL4O14531 572 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 RIPK2O43353 540 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CST8O60676 142 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ACSL3O95573 720 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 TRUB2O95900 331 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 AGTP01019 485 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ITGAVP06756 1048 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CTSHP09668 335 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CYBAP13498 195 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ELNP15502 786 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 IBSPP21815 317 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 KDELR1P24390 212 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 MIPP30301 263 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 FLT3LGP49771 235 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 RAB27AP51159 221 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 GJA9P57773 515 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 EIF3EP60228 445 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 MAGOHP61326 146 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 SLC6A3Q01959 620 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ROR1Q01973 937 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 PDK2Q15119 407 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 PPP1R26Q5T8A7 1209 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 MICALCLQ6ZW33 695 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 BBS12Q6ZW61 710 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CENPUQ71F23 418 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ALLCQ8N6M5 410 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 TOP6BLQ8N6T0 577 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 UHMK1Q8TAS1 419 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 RXFP2Q8WXD0 754 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 RAPGEF5Q92565 580 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CFAP57Q96MR6 1250 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ZMAT2Q96NC0 199 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 TXLNGYQ9BZA5 131 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ROPN1BQ9BZX4 212 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CDC42EP4Q9H3Q1 356 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ROPN1Q9HAT0 212 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 DNPEPQ9ULA0 475 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 TPX2Q9ULW0 747 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 DRG1Q9Y295 367 aaKnown RBP11.27□□□□□ -0.61
SPIDR-204ENST00000517824 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.61
SPIDR-204ENST00000517824 ARHGEF37A1IGU5 675 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 H7C0C1 242 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 SMAPO00193 183 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 NDUFAB1O14561 156 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 DNALI1O14645 258 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 APOL1O14791 398 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 PPEF2O14830 753 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 GPR182O15218 404 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 GRAP2O75791 330 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 INHAP05111 366 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 PDGFRBP09619 1106 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 LCP1P13796 627 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 CCDC130P13994 396 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 TCF4P15884 667 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 MDH1P40925 334 aaKnown RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 ATP5OP48047 213 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 ATP11AP98196 1134 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 SLC29A2Q14542 456 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 MORF4L2Q15014 288 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 ATP13A4Q4VNC1 1196 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 TTC19Q6DKK2 380 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 DARS2Q6PI48 645 aaKnown RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 POTEHQ6S545 545 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 DSTYKQ6XUX3 929 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 FAM228AQ86W67 206 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 METTL23Q86XA0 190 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 TMEM130Q8N3G9 435 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 ZCCHC9Q8N567 271 aaKnown RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 STK32AQ8WU08 396 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 FAM172AQ8WUF8 416 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 TEKT4Q8WW24 435 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 P3H4Q92791 437 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 NKD2Q969F2 451 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-204ENST00000517824 TBCBQ99426 244 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 FERMT1Q9BQL6 677 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 HERPUD2Q9BSE4 406 aa11.26□□□□□ -0.61
SPIDR-204ENST00000517824 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms