RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 ABLIM3O94929 683 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 FGAP02671 866 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 A1BGP04217 495 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SNHG28P0DPA3 235 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 HSPA6P17066 643 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 IBSPP21815 317 aaPredicted RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 FPR3P25089 353 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 HTR1BP28222 390 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PRKAR1BP31321 381 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 GKP32189 559 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MTHFSP49914 203 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ALDH5A1P51649 535 aaPredicted RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ARFIP2P53365 341 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 GHRHRQ02643 423 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 RAB32Q13637 225 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZIK1Q3SY52 487 aaPredicted RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZNF260Q3ZCT1 412 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PLA1AQ53H76 456 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 RNASE12Q5GAN4 147 aaKnown RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MEX3CQ5U5Q3 659 aaKnown RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SHC4Q6S5L8 630 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 BCDIN3DQ7Z5W3 292 aaKnown RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SPARTQ8N0X7 666 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 BPIFB1Q8TDL5 484 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 COQ8BQ96D53 544 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 HOOK2Q96ED9 719 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PRR25Q96S07 402 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 P2RX7Q99572 595 aaKnown RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 C17orf80Q9BSJ5 609 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 DPH1Q9BZG8 443 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MS4A7Q9GZW8 240 aaPredicted RBP3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SNX15Q9NRS6 342 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 STAP2Q9UGK3 403 aa3.19□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TCRBV5S1A1TA0A578 114 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 BTN3A1O00481 513 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CES2O00748 559 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 AP1G1O43747 822 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TBC1D4O60343 1298 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MT-CO3P00414 261 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CBSLP0DN79 551 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 NPR1P16066 1061 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 NCLP19338 710 aaKnown RBP3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 EPHA3P29320 983 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CBSP35520 551 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 BCAT1P54687 386 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 RAPGEF1Q13905 1077 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CCNIQ14094 377 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 LRRC41Q15345 812 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PTPROQ16827 1216 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 LY6KQ17RY6 165 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ANO7Q6IWH7 933 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 DPY19L3Q6ZPD9 716 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PTCHD4Q6ZW05 846 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZNF398Q8TD17 642 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZC3H10Q96K80 434 aaKnown RBP3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 AIFM3Q96NN9 605 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 EFHD1Q9BUP0 239 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TYW1Q9NV66 732 aaKnown RBP3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ASIC5Q9NY37 505 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MAFFQ9ULX9 164 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 USP22Q9UPT9 525 aa3.18□□□□□ -1.9
SCARNA16.2-201ENST00000516520 FAM90A10PA6NDY2 464 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 FCHO1O14526 889 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PHGDHO43175 533 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PMPCBO75439 489 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 UBXN7O94888 489 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 VNN1O95497 513 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 EN2P19622 333 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SCP2P22307 547 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TKTP29401 623 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PSG6Q00889 435 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 SLC13A2Q13183 592 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CTBP1Q13363 440 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PIN1Q13526 163 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZNF267Q14586 743 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 RBMS2Q15434 407 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 INSCQ1MX18 579 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 C10orf25Q5T742 122 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CRELD2Q6UXH1 353 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 MPP5Q8N3R9 675 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 NGDNQ8NEJ9 315 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 OSR1Q8TAX0 266 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 NSMCE1Q8WV22 266 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TMEM171Q8WVE6 324 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 RAPGEF4Q8WZA2 1011 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PPP2R3CQ969Q6 453 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 PPP1R9BQ96SB3 815 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 BRIP1Q9BX63 1249 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 ZNF518BQ9C0D4 1074 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 EBF3Q9H4W6 596 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 GBA2Q9HCG7 927 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TRIM36Q9NQ86 728 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 GABBR1Q9UBS5 961 aa3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 DRG1Q9Y295 367 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 NOP58Q9Y2X3 529 aaKnown RBP3.17□□□□□ -1.9
SCARNA16.2-201ENST00000516520 TMPRSS11DO60235 418 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 IGSF3O75054 1194 aa3.16□□□□□ -1.9
SCARNA16.2-201ENST00000516520 OAZ2O95190 189 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms