RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
NR1I3-234ENST00000515621 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NR1I3-234ENST00000515621 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 UBA3Q8TBC4 463 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 SPPL2BQ8TCT7 592 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
NR1I3-234ENST00000515621 ZNF558Q96NG5 402 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 RUNDC3BQ96NL0 473 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 TBCBQ99426 244 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 CARD6Q9BX69 1037 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 CWH43Q9H720 699 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NR1I3-234ENST00000515621 COL4A4P53420 1690 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 NCK2O43639 380 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 TBC1D4O60343 1298 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 AP1G2O75843 785 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 RNF8O76064 485 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 ITGB1P05556 798 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 GPD1P21695 349 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 ADORA2BP29275 332 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 AIF1P55008 147 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 PRSS12P56730 875 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 UBXN4Q92575 508 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 ALG3Q92685 438 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 MYLPFQ96A32 169 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 RNPC3Q96LT9 517 aaKnown RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 SLC9A7Q96T83 725 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 TTPALQ9BTX7 342 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
NR1I3-234ENST00000515621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
NR1I3-234ENST00000515621 UQCRHLA0A096LP55 91 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 MYBPHLA2RUH7 354 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 ATP2C2O75185 946 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 DAB1O75553 588 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 C1RP00736 705 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 FGBP02675 491 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 SOD2P04179 222 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 UQCRHP07919 91 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 PSMA2P25787 234 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 SDC4P31431 198 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 MATKP42679 507 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 ZNF135P52742 658 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 ZNF252P-AS1Q0IIN9 211 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 GPR17Q13304 367 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 CYP4A22Q5TCH4 519 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 OR6B2Q6IFH4 312 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 GPR153Q6NV75 609 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 KCNT2Q6UVM3 1135 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 SPATA2LQ8IUW3 424 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 RCOR2Q8IZ40 523 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 EIF1ADQ8N9N8 165 aaKnown RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 SPATA4Q8NEY3 305 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 HERVK_113Q902F9 699 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 CENPIQ92674 756 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 PGAP3Q96FM1 320 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-234ENST00000515621 IGSF21Q96ID5 467 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 SLC2A13Q96QE2 648 aa9.52□□□□□ -0.89
NR1I3-234ENST00000515621 SMOQ99835 787 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms