RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 PPM1KQ8N3J5 372 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 SLC44A1Q8WWI5 657 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 CMTM5Q96DZ9 223 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 KLF6Q99612 283 aaPredicted RBP13.34□□□□□ -0.27
SMAD1-215ENST00000515385 STRA6Q9BX79 667 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 TMEM117Q9H0C3 514 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 ACP6Q9NPH0 428 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 RAB20Q9NX57 234 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 TMOD2Q9NZR1 351 aa13.34□□□□□ -0.27
SMAD1-215ENST00000515385 PHLPP1O60346 1717 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 H3BSA7 217 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 INHBAP08476 426 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.27
SMAD1-215ENST00000515385 ADRA2BP18089 450 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 PRDX6P30041 224 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 DLG4P78352 724 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 SLC25A3Q00325 362 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 ENOSF1Q7L5Y1 443 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 KAT5Q92993 513 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 SERAC1Q96JX3 654 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 SRPK1Q96SB4 655 aaKnown RBP13.33□□□□□ -0.27
SMAD1-215ENST00000515385 PRPF18Q99633 342 aaKnown RBP13.33□□□□□ -0.27
SMAD1-215ENST00000515385 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 FRMD8P1Q9BZ68 369 aaPredicted RBP13.33□□□□□ -0.27
SMAD1-215ENST00000515385 IKZF4Q9H2S9 585 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 ZNF180Q9UJW8 692 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 VAV3Q9UKW4 847 aa13.33□□□□□ -0.27
SMAD1-215ENST00000515385 TDRKHQ9Y2W6 561 aaKnown RBP13.33□□□□□ -0.27
SMAD1-215ENST00000515385 COL24A1Q17RW2 1714 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 ZNF701M0R085 212 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 SNNO75324 88 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 FOSP01100 380 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 PHKA2P46019 1235 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 ALDH3B2P48448 385 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 OASLQ15646 514 aaKnown RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 BCL2A1Q16548 175 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 TEX44Q53QW1 395 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 ODR4Q5SWX8 454 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 LGSNQ5TDP6 509 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 TTC39BQ5VTQ0 682 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 KRT39Q6A163 491 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 THOC7Q6I9Y2 204 aaKnown RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 ARCQ7LC44 396 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 WDR75Q8IWA0 830 aaKnown RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 MARCH10Q8NA82 808 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 GLIS1Q8NBF1 620 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 RDH13Q8NBN7 331 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 FBXO36Q8NEA4 188 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 SGF29Q96ES7 293 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 NUF2Q9BZD4 464 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 CNOT11Q9UKZ1 510 aaKnown RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 PLLPQ9Y342 182 aa13.33□□□□□ -0.28
SMAD1-215ENST00000515385 COL5A2P05997 1499 aaPredicted RBP13.33□□□□□ -0.28
SMAD1-215ENST00000515385 CIITAP33076 1130 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 ECE1P42892 770 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 EPHB1P54762 984 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 PFKPQ01813 784 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 CYP4A11Q02928 519 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 PDIK1LQ8N165 341 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 SCAIQ8N9R8 606 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 BORCS5Q969J3 196 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 DHX33Q9H6R0 707 aaKnown RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 BCAS3Q9H6U6 928 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 THAP1Q9NVV9 213 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 EFR3BQ9Y2G0 817 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 MEI4A8MW99 385 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 H0YJX3 145 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 CLASP2O75122 1294 aaKnown RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 KLRK1P26718 216 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 TAS2R40P59535 323 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 NAA20P61599 178 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 TUBA4AP68366 448 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 FAAP100Q0VG06 881 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 UBAP2LQ14157 1087 aaKnown RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 C1orf220Q5T0J3 134 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms