RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PSMC1P62191 440 aaKnown RBP21.34■■□□□ 1.01
USP53-208ENST00000514305 RPL10AP62906 217 aaKnown RBP21.34■■□□□ 1.01
USP53-208ENST00000514305 PFKPQ01813 784 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 CFAP221Q4G0U5 840 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 MDH1BQ5I0G3 518 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 VSTM1Q6UX27 236 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 ASCL5Q7RTU5 278 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 TCEAL8Q8IYN2 117 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 ELMOD1Q8N336 334 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 UBR7Q8N806 425 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 ANP32BQ92688 251 aaKnown RBP21.34■■□□□ 1.01
USP53-208ENST00000514305 KAT5Q92993 513 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 CYFIP2Q96F07 1278 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 KXD1Q9BQD3 176 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 NLRC4Q9NPP4 1024 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 AVENQ9NQS1 362 aaPredicted RBP21.34■■□□□ 1.01
USP53-208ENST00000514305 HESX1Q9UBX0 185 aa21.34■■□□□ 1.01
USP53-208ENST00000514305 A0A1W2PQJ5 194 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 MYBPHLA2RUH7 354 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 MTMR11A4FU01 709 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 GOLGA6L6A8MZA4 724 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 NOL4O94818 638 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 OR4Q2P0C623 313 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 KLK7P49862 253 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 RNF19BQ6ZMZ0 732 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 SLC4A11Q8NBS3 891 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 WHAMMQ8TF30 809 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 MARVELD3Q96A59 401 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 MCRS1Q96EZ8 462 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 CEP295NLQ96MC4 621 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 TMEM209Q96SK2 561 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 CORO1BQ9BR76 489 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 ABI2Q9NYB9 513 aaPredicted RBP21.33■■□□□ 1.01
USP53-208ENST00000514305 INSL5Q9Y5Q6 135 aa21.33■■□□□ 1.01
USP53-208ENST00000514305 FOXN3O00409 490 aaPredicted RBP21.32■■□□□ 1
USP53-208ENST00000514305 ZNF197O14709 1029 aa21.32■■□□□ 1
USP53-208ENST00000514305 TRIM66O15016 1216 aa21.32■■□□□ 1
USP53-208ENST00000514305 DCNP07585 359 aaKnown RBP21.32■■□□□ 1
USP53-208ENST00000514305 ANXA13P27216 316 aa21.32■■□□□ 1
USP53-208ENST00000514305 SOX5P35711 763 aa21.32■■□□□ 1
USP53-208ENST00000514305 MAGEA11P43364 429 aa21.32■■□□□ 1
USP53-208ENST00000514305 STARD6P59095 220 aa21.32■■□□□ 1
USP53-208ENST00000514305 SLC5A9Q2M3M2 681 aa21.32■■□□□ 1
USP53-208ENST00000514305 MGAT5BQ3V5L5 792 aa21.32■■□□□ 1
USP53-208ENST00000514305 ARHGAP17Q68EM7 881 aa21.32■■□□□ 1
USP53-208ENST00000514305 DPY19L2P1Q6NXN4 242 aa21.32■■□□□ 1
USP53-208ENST00000514305 LRRTM3Q86VH5 581 aa21.32■■□□□ 1
USP53-208ENST00000514305 VSTM4Q8IW00 320 aa21.32■■□□□ 1
USP53-208ENST00000514305 FAM71AQ8IYT1 594 aa21.32■■□□□ 1
USP53-208ENST00000514305 PJA1Q8NG27 643 aa21.32■■□□□ 1
USP53-208ENST00000514305 MYLPFQ96A32 169 aa21.32■■□□□ 1
USP53-208ENST00000514305 SMARCD1Q96GM5 515 aa21.32■■□□□ 1
USP53-208ENST00000514305 PCED1BQ96HM7 432 aa21.32■■□□□ 1
USP53-208ENST00000514305 PGLYRP2Q96PD5 576 aa21.32■■□□□ 1
USP53-208ENST00000514305 HNRNPABQ99729 332 aaKnown RBP21.32■■□□□ 1
USP53-208ENST00000514305 DPEP3Q9H4B8 488 aa21.32■■□□□ 1
USP53-208ENST00000514305 CRTAC1Q9NQ79 661 aa21.32■■□□□ 1
USP53-208ENST00000514305 EHD2Q9NZN4 543 aa21.32■■□□□ 1
USP53-208ENST00000514305 LUC7L2Q9Y383 392 aaKnown RBP21.32■■□□□ 1
USP53-208ENST00000514305 F8VZ95 297 aa21.31■■□□□ 1
USP53-208ENST00000514305 ATP2C2O75185 946 aa21.31■■□□□ 1
USP53-208ENST00000514305 ECI2O75521 394 aa21.31■■□□□ 1
USP53-208ENST00000514305 SEC24AO95486 1093 aa21.31■■□□□ 1
USP53-208ENST00000514305 FERP16591 822 aa21.31■■□□□ 1
USP53-208ENST00000514305 GNA15P30679 374 aa21.31■■□□□ 1
USP53-208ENST00000514305 PDE6CP51160 858 aa21.31■■□□□ 1
USP53-208ENST00000514305 ZNF75DP51815 510 aa21.31■■□□□ 1
USP53-208ENST00000514305 APBA1Q02410 837 aa21.31■■□□□ 1
USP53-208ENST00000514305 PRKCQQ04759 706 aa21.31■■□□□ 1
USP53-208ENST00000514305 DUSP4Q13115 394 aa21.31■■□□□ 1
USP53-208ENST00000514305 VEPH1Q14D04 833 aa21.31■■□□□ 1
USP53-208ENST00000514305 MLF2Q15773 248 aaPredicted RBP21.31■■□□□ 1
USP53-208ENST00000514305 CYP4A22Q5TCH4 519 aa21.31■■□□□ 1
USP53-208ENST00000514305 PDZD4Q76G19 769 aaPredicted RBP21.31■■□□□ 1
USP53-208ENST00000514305 DRC7Q8IY82 874 aa21.31■■□□□ 1
USP53-208ENST00000514305 PKMYT1Q99640 499 aa21.31■■□□□ 1
USP53-208ENST00000514305 PDCL3Q9H2J4 239 aa21.31■■□□□ 1
USP53-208ENST00000514305 ASB3Q9Y575 518 aa21.31■■□□□ 1
USP53-208ENST00000514305 CEP83Q9Y592 693 aa21.31■■□□□ 1
USP53-208ENST00000514305 FAM200BP0CF97 657 aa21.3■■□□□ 1
USP53-208ENST00000514305 HOXB3P14651 431 aaPredicted RBP21.3■■□□□ 1
USP53-208ENST00000514305 CEBPBP17676 345 aa21.3■■□□□ 1
USP53-208ENST00000514305 KRT9P35527 623 aa21.3■■□□□ 1
USP53-208ENST00000514305 GRIK1P39086 918 aa21.3■■□□□ 1
USP53-208ENST00000514305 ZNF132P52740 706 aa21.3■■□□□ 1
USP53-208ENST00000514305 EPHB3P54753 998 aa21.3■■□□□ 1
USP53-208ENST00000514305 ZBED6P86452 979 aa21.3■■□□□ 1
USP53-208ENST00000514305 CNGA2Q16280 664 aa21.3■■□□□ 1
USP53-208ENST00000514305 TAF12Q16514 161 aa21.3■■□□□ 1
USP53-208ENST00000514305 MEA1Q16626 185 aa21.3■■□□□ 1
USP53-208ENST00000514305 SLC44A4Q53GD3 710 aa21.3■■□□□ 1
USP53-208ENST00000514305 ITIH5Q86UX2 942 aa21.3■■□□□ 1
USP53-208ENST00000514305 ZNF677Q86XU0 584 aa21.3■■□□□ 1
USP53-208ENST00000514305 ATAD1Q8NBU5 361 aa21.3■■□□□ 1
USP53-208ENST00000514305 ZNF512Q96ME7 567 aaPredicted RBP21.3■■□□□ 1
USP53-208ENST00000514305 TWNKQ96RR1 684 aa21.3■■□□□ 1
USP53-208ENST00000514305 SEPT5Q99719 369 aaPredicted RBP21.3■■□□□ 1
USP53-208ENST00000514305 FOXQ1Q9C009 403 aa21.3■■□□□ 1
USP53-208ENST00000514305 GRPEL1Q9HAV7 217 aa21.3■■□□□ 1
USP53-208ENST00000514305 HMGXB4Q9UGU5 601 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms