RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 OR5B17Q8NGF7 314 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 CSGALNACT1Q8TDX6 532 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 GIPC2Q8TF65 315 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 FAM3CQ92520 227 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 NELL1Q92832 810 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 TRMT2BQ96GJ1 504 aaKnown RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 FUBP3Q96I24 572 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCL28-203ENST00000513525 FAM84AQ96KN4 292 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 CHRDQ9H2X0 955 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 C8orf33Q9H7E9 229 aaPredicted RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 PRMT8Q9NR22 394 aaPredicted RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 MYOFQ9NZM1 2061 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 BICDL2A1A5D9 508 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 F11P03951 625 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 SLC19A1P41440 591 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 STX17P56962 302 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 RPL10AP62906 217 aaKnown RBP10.51□□□□□ -0.73
CCL28-203ENST00000513525 PSMD2Q13200 908 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 PSMD6Q15008 389 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 FAM171BQ6P995 826 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 FOXR2Q6PJQ5 311 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 TRAPPC11Q7Z392 1133 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 CMTM8Q8IZV2 173 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 XXYLT1Q8NBI6 393 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 ZBTB44Q8NCP5 570 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 BPIFB1Q8TDL5 484 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 HPDLQ96IR7 371 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 MYRFLQ96LU7 910 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 LRRC3BQ96PB8 259 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 CGRRF1Q99675 332 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 PI4K2AQ9BTU6 479 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 SLC46A2Q9BY10 475 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 THAP9Q9H5L6 903 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 UXTQ9UBK9 157 aaPredicted RBP10.51□□□□□ -0.73
CCL28-203ENST00000513525 GTF3C4Q9UKN8 822 aa10.51□□□□□ -0.73
CCL28-203ENST00000513525 NDRG2Q9UN36 371 aaKnown RBP10.51□□□□□ -0.73
CCL28-203ENST00000513525 MYBPHLA2RUH7 354 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 CLIC2O15247 247 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 CCP110O43303 1012 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 NOL4O94818 638 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 PRAMEF12O95522 483 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 WARSP23381 471 aaKnown RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 ACAT1P24752 427 aaKnown RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 EEF1GP26641 437 aaKnown RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 MAGEA11P43364 429 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 CDR1P51861 262 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 CYP24A1Q07973 514 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 MTAPQ13126 283 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 KNOP1Q1ED39 458 aaKnown RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 DNTTIP2Q5QJE6 756 aaKnown RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 RALGPS2Q86X27 583 aaPredicted RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 C17orf53Q8N3J3 647 aaPredicted RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 CELF5Q8N6W0 485 aaKnown RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 TMEM174Q8WUU8 243 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 KBTBD7Q8WVZ9 684 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 CEP295NLQ96MC4 621 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 FNBP1Q96RU3 617 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 FAM126AQ9BYI3 521 aaPredicted RBP10.5□□□□□ -0.73
CCL28-203ENST00000513525 KIF9Q9HAQ2 790 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 CDH9Q9ULB4 789 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 PCDHGA2Q9Y5H1 932 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 DNAH14Q0VDD8 3507 aa10.5□□□□□ -0.73
CCL28-203ENST00000513525 SLC38A8A6NNN8 435 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 SPECC1L-ADORA2AF8WAN1 911 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 KIF2AO00139 706 aaPredicted RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 LILRB5O75023 590 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 TACC1O75410 805 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 TADA3O75528 432 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 STAU1O95793 577 aaKnown RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 TPM2P07951 284 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 FAM163BP0C2L3 166 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CHRNB1P11230 501 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 TNNI1P19237 187 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CCNE1P24864 410 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CYP2F1P24903 491 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CTHP32929 405 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 PBX1P40424 430 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 GPR15P49685 360 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CYP2J2P51589 502 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 PRR20EP86478 221 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 PRR20CP86479 221 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 PRR20DP86480 221 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 PRR20BP86481 221 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 PRR20AP86496 221 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CSTF1Q05048 431 aaKnown RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 ZNF268Q14587 947 aaPredicted RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 MAPRE1Q15691 268 aaKnown RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 TTI2Q6NXR4 508 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 C4orf50Q6ZRC1 276 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 SPATA2LQ8IUW3 424 aaPredicted RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 FAM114A1Q8IWE2 563 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 SUMF1Q8NBK3 374 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms