RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TBX10O75333 385 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 NDUFB10O96000 172 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 MMP1P03956 469 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 GNAI2P04899 355 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 CT47B1P0C2W7 299 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 NDUFV1P49821 464 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 CLUL1Q15846 466 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 ST3GAL2Q16842 350 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 PLEKHG4Q58EX7 1191 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 TMEM63BQ5T3F8 832 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 SLC9C2Q5TAH2 1124 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 MRM1Q6IN84 353 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 TMEM184AQ6ZMB5 413 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 EEPD1Q7L9B9 569 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM160B2Q86V87 743 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 FBXO16Q8IX29 292 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 MYOCDQ8IZQ8 938 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 C7orf31Q8N865 590 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 GMCL1P1Q8NEA9 526 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 OR6J1Q8NGC5 347 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 STAG1Q8WVM7 1258 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 SUSD6Q92537 303 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 SEPT8Q92599 483 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 NELL1Q92832 810 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 APBB2Q92870 758 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 DYNLL2Q96FJ2 89 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 RPGRIP1Q96KN7 1286 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 C16orf92Q96LL3 132 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 CTAGE1Q96RT6 745 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 RTP3Q9BQQ7 232 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 ZNF287Q9HBT7 754 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 RNF146Q9NTX7 359 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 RIC8BQ9NVN3 520 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 SORCS3Q9UPU3 1222 aa4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 ANKRD11Q6UB99 2663 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-218ENST00000513341 A0A1W2PQU0 124 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 PRR5-ARHGAP8B1AHC4 643 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 RSPH10B2B2RC85 870 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 GRM6O15303 877 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 DDAH1O94760 285 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 C4BPAP04003 597 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 RSPH10BP0C881 870 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 TXNP10599 105 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 HOXB8P17481 243 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 AOC1P19801 751 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 NR4A1P22736 598 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 STAT2P52630 851 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ARHGAP8P85298 464 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 CAMK1Q14012 370 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 PPP2R5BQ15173 497 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ELAVL1Q15717 326 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 DDR2Q16832 855 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 TCTN1Q2MV58 587 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 TRIM71Q2Q1W2 868 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 SBK1Q52WX2 424 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ZNF618Q5T7W0 954 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 LARP1BQ659C4 914 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 FAM111BQ6SJ93 734 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 DPH6Q7L8W6 267 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 TMEM105Q8N8V8 129 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 WDR48Q8TAF3 677 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ATP8B4Q8TF62 1192 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 SDR42E1Q8WUS8 393 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 HNRNPLLQ8WVV9 542 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 RUBCNQ92622 972 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ZNF669Q96BR6 464 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 NUP88Q99567 741 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 MNTQ99583 582 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 CDCA3Q99618 268 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 MEIS3Q99687 375 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 KATNAL1Q9BW62 490 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 IPPKQ9H8X2 491 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 CLIP2Q9UDT6 1046 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 NOP58Q9Y2X3 529 aaKnown RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 USP15Q9Y4E8 981 aaPredicted RBP4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ATP23Q9Y6H3 246 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 CEP250Q9BV73 2442 aa4.28□□□□□ -1.72
PDLIM5-218ENST00000513341 ZNF532Q9HCE3 1301 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 IGKV6D-41A0A0C4DH26 115 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 TMEM232C9JQI7 657 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 HAS3O00219 553 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 LINC01565O15544 149 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 FAM20BO75063 409 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 TTLL1O95922 423 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 PDGFBP01127 241 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ICAM1P05362 532 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 LINC00271P0C7V0 271 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SRGAP2BP0DMP2 458 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 CYP2D6P10635 497 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 FGFR1P11362 822 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ALAS1P13196 640 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 EDNRBP24530 442 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 CTNNB1P35222 781 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ALDH5A1P51649 535 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ADAM8P78325 824 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ATP8B2P98198 1209 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 UBE3AQ05086 875 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 MAPK7Q13164 816 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms