RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	PPP2R3C	Q969Q6	453 aa		4.65	□□□□□ -1.67
LINC01088-210	ENST00000513153	RSPRY1	Q96DX4	576 aa		4.65	□□□□□ -1.67
LINC01088-210	ENST00000513153	TRIM54	Q9BYV2	358 aa		4.65	□□□□□ -1.67
LINC01088-210	ENST00000513153	CIPC	Q9C0C6	399 aa		4.65	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZSCAN32	Q9NX65	697 aa		4.65	□□□□□ -1.67
LINC01088-210	ENST00000513153	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.65	□□□□□ -1.67
LINC01088-210	ENST00000513153	UBE2Q2L	H0YL09	131 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	AP4M1	O00189	453 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	BTN3A1	O00481	513 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	ALDH1L1	O75891	902 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	UBXN7	O94888	489 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	PLCD1	P51178	756 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	E2F1	Q01094	437 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	CYP1B1	Q16678	543 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	PLA1A	Q53H76	456 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	SERPINA13P	Q6UXR4	307 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	OR6B3	Q8NGW1	331 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	SLC35G2	Q8TBE7	412 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	GPATCH3	Q96I76	525 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	RHOBTB2	Q9BYZ6	727 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	GABBR1	Q9UBS5	961 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZNF112	Q9UJU3	913 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	AFG3L2	Q9Y4W6	797 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153	SNX14	Q9Y5W7	946 aa		4.64	□□□□□ -1.67
LINC01088-210	ENST00000513153		A0A1W2PPL8	197 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	TCRBV5S1A1T	A0A578	114 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	MYMK	A6NI61	221 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	VNN1	O95497	513 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	CYP2A6	P11509	494 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	NPR1	P16066	1061 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	RENBP	P51606	427 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	ALDH5A1	P51649	535 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	PRKAG1	P54619	331 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	RNASE12	Q5GAN4	147 aa	Known RBP	4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	SIRT6	Q8N6T7	355 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	PRSS3P2	Q8NHM4	247 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	BPIFB1	Q8TDL5	484 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	ADAMTS18	Q8TE60	1221 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	JPH3	Q8WXH2	748 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	AIFM3	Q96NN9	605 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	NT5C1B	Q96P26	610 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	C17orf80	Q9BSJ5	609 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	DPH1	Q9BZG8	443 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	GBA2	Q9HCG7	927 aa	Predicted RBP	4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	NMRK2	Q9NPI5	230 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	TYW1	Q9NV66	732 aa	Known RBP	4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	KLHL13	Q9P2N7	655 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	AMFR	Q9UKV5	643 aa		4.63	□□□□□ -1.67
LINC01088-210	ENST00000513153	E2F8	A0AVK6	867 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	ERVV-2	B6SEH9	535 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	PSMD9	O00233	223 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	TBC1D4	O60343	1298 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	USP1	O94782	785 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	FGA	P02671	866 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	KIT	P10721	976 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	FPR3	P25089	353 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	IL1R2	P27930	398 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	LINC00205	P59089	165 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	MCL1	Q07820	350 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	TTF1	Q15361	905 aa	Predicted RBP	4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	PTCHD3	Q3KNS1	767 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	KRTAP5-4	Q6L8H1	288 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	B3GNT9	Q6UX72	402 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZNF813	Q6ZN06	617 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	MEPCE	Q7L2J0	689 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	RAB11FIP4	Q86YS3	637 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	SFTPA1	Q8IWL2	248 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	PPP1R35	Q8TAP8	253 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	TMEM171	Q8WVE6	324 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	RAPGEF4	Q8WZA2	1011 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	COQ8B	Q96D53	544 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	CCDC17	Q96LX7	622 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	FYTTD1	Q96QD9	318 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	PRR25	Q96S07	402 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	ACO2	Q99798	780 aa	Known RBP	4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	XPNPEP3	Q9NQH7	507 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZNF180	Q9UJW8	692 aa		4.62	□□□□□ -1.67
LINC01088-210	ENST00000513153	BTBD19	C9JJ37	291 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	FCHO1	O14526	889 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	PMPCB	O75439	489 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	A1BG	P04217	495 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	ATP5F1	P24539	256 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	PRKAR1B	P31321	381 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	AGFG1	P52594	562 aa	Known RBP	4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	SLC13A2	Q13183	592 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	PIN1	Q13526	163 aa	Predicted RBP	4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	RAB32	Q13637	225 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	CCNI	Q14094	377 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	FAM187B	Q17R55	369 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	DPY19L3	Q6ZPD9	716 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	TPH2	Q8IWU9	490 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	SPART	Q8N0X7	666 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	MPP5	Q8N3R9	675 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	NRAC	Q8N912	160 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	LRGUK	Q96M69	825 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	FAM118B	Q9BPY3	351 aa		4.61	□□□□□ -1.67
LINC01088-210	ENST00000513153	ZMAT3	Q9HA38	289 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms