RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 LMAN1LQ9HAT1 526 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 APOBEC3GQ9HC16 384 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 TRPV5Q9NQA5 729 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 GKN1Q9NS71 199 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 RBM12Q9NTZ6 932 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 TMEM30AQ9NV96 361 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 RAB20Q9NX57 234 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 DUS2Q9NX74 493 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 OBP2AQ9NY56 170 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 DLGAP2Q9P1A6 1054 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 ARMCX3Q9UH62 379 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 WNT6Q9Y6F9 365 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 R4GN57 208 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 MIA3Q5JRA6 1907 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 BICDL2A1A5D9 508 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 ZNF840PA6NDX5 716 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 ARNTLO00327 626 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 SP9P0CG40 484 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 IRF1P10914 325 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 MBL2P11226 248 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-208ENST00000512928 ARSAP15289 507 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 WEE1P30291 646 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CTHP32929 405 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 PPP1R2P41236 205 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 MAGEA9P43362 315 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 PPP3CCP48454 512 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 SLC5A3P53794 718 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 MTAPQ13126 283 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 RUNX3Q13761 415 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 ZNF268Q14587 947 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-208ENST00000512928 PPP2R5DQ14738 602 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 PDGFRLQ15198 375 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CBWD6Q4V339 395 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CBWD3Q5JTY5 395 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CBWD5Q5RIA9 395 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 C1orf228Q6PIY5 440 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 ZC3H14Q6PJT7 736 aaKnown RBP6.89□□□□□ -1.31
KDM3B-208ENST00000512928 TXNDC11Q6PKC3 985 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 RALGPS2Q86X27 583 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-208ENST00000512928 FUKQ8N0W3 1084 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CPA6Q8N4T0 437 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 PDZD8Q8NEN9 1154 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 SCAMP5Q8TAC9 235 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 RIN3Q8TB24 985 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 SEMA4DQ92854 862 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CYFIP2Q96F07 1278 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 MSANTD3Q96H12 275 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CEP295NLQ96MC4 621 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
KDM3B-208ENST00000512928 TWNKQ96RR1 684 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 ARID3AQ99856 593 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 OSBPL6Q9BZF3 934 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CYP3A43Q9HB55 503 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CFAP97Q9P2B7 532 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CHORDC1Q9UHD1 332 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-208ENST00000512928 CPQQ9Y646 472 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 COL4A2P08572 1712 aa6.89□□□□□ -1.31
KDM3B-208ENST00000512928 OBSL1O75147 1896 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 SOBPA7XYQ1 873 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 LEFTY2O00292 366 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CYP26A1O43174 497 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CILPO75339 1184 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 BEST1O76090 585 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CD19P15391 556 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 ACO1P21399 889 aaKnown RBP6.88□□□□□ -1.31
KDM3B-208ENST00000512928 BMP6P22004 513 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 NBL1P41271 181 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 RPS9P46781 194 aaKnown RBP6.88□□□□□ -1.31
KDM3B-208ENST00000512928 SLC8A3P57103 927 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 AMPD2Q01433 879 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 ENPEPQ07075 957 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 INCA1Q0VD86 236 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CETN1Q12798 172 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 GRSF1Q12849 480 aaKnown RBP eCLIP6.88□□□□□ -1.31
KDM3B-208ENST00000512928 USP4Q13107 963 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 NR1H3Q13133 447 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 PAK1Q13153 545 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CUL2Q13617 745 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 MORC3Q14149 939 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 ZNF77Q15935 545 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 HECTD3Q5T447 861 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 FOXR2Q6PJQ5 311 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 Q6ZS52 159 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 PAQR9Q6ZVX9 377 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 FILIP1Q7Z7B0 1213 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CRYBG2Q8N1P7 616 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 DCLK2Q8N568 766 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 OSCP1Q8WVF1 389 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 ATRIPQ8WXE1 791 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 TATDN2Q93075 761 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 ATP2A3Q93084 1043 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 EXOC4Q96A65 974 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CLDN23Q96B33 292 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CEP63Q96MT8 703 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 SMOQ99835 787 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 FAM83CQ9BQN1 747 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 RNF38Q9H0F5 515 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CLSTN2Q9H4D0 955 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CCSER2Q9H7U1 834 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms