RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 LIX1LQ8IVB5 337 aa6.45□□□□□ -1.38
CHD1-209ENST00000512844 BOLLQ8N9W6 283 aaKnown RBP6.45□□□□□ -1.38
CHD1-209ENST00000512844 TNIP3Q96KP6 325 aa6.45□□□□□ -1.38
CHD1-209ENST00000512844 SYNPO2LQ9H987 977 aa6.45□□□□□ -1.38
CHD1-209ENST00000512844 SERTAD4Q9NUC0 356 aa6.45□□□□□ -1.38
CHD1-209ENST00000512844 WNT6Q9Y6F9 365 aa6.45□□□□□ -1.38
CHD1-209ENST00000512844 MGST3O14880 152 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 SUV39H1O43463 412 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 SNX2O60749 519 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 ENGP17813 658 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 BCAT1P54687 386 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 SUMO2P61956 95 aaKnown RBP6.44□□□□□ -1.38
CHD1-209ENST00000512844 PARS2Q7L3T8 475 aaKnown RBP6.44□□□□□ -1.38
CHD1-209ENST00000512844 BEND5Q7L4P6 421 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 FANCBQ8NB91 859 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 ABHD11Q8NFV4 315 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 RP9Q8TA86 221 aaKnown RBP6.44□□□□□ -1.38
CHD1-209ENST00000512844 SOCS4Q8WXH5 440 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 TBCBQ99426 244 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 C17orf80Q9BSJ5 609 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 KLK15Q9H2R5 256 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 HEYLQ9NQ87 328 aaPredicted RBP6.44□□□□□ -1.38
CHD1-209ENST00000512844 PADI4Q9UM07 663 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 SNX14Q9Y5W7 946 aa6.44□□□□□ -1.38
CHD1-209ENST00000512844 IDEP14735 1019 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 STT3AP46977 705 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 SP2Q02086 613 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 LONRF1Q17RB8 773 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 PTCHD3Q3KNS1 767 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 AARS2Q5JTZ9 985 aaKnown RBP6.43□□□□□ -1.38
CHD1-209ENST00000512844 PCID2Q5JVF3 399 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 DENND2CQ68D51 928 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 SLC9A4Q6AI14 798 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 CEP85Q6P2H3 762 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 FBXO42Q6P3S6 717 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 NGDNQ8NEJ9 315 aaKnown RBP6.43□□□□□ -1.38
CHD1-209ENST00000512844 TBC1D5Q92609 795 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 TIMP4Q99727 224 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 TRIM5Q9C035 493 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 INO80BQ9C086 356 aaPredicted RBP6.43□□□□□ -1.38
CHD1-209ENST00000512844 ARNT2Q9HBZ2 717 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 STARD7Q9NQZ5 370 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 DNMT3BQ9UBC3 853 aaKnown RBP6.43□□□□□ -1.38
CHD1-209ENST00000512844 CEP83Q9Y592 693 aa6.43□□□□□ -1.38
CHD1-209ENST00000512844 CD3EAPO15446 510 aaKnown RBP6.42□□□□□ -1.38
CHD1-209ENST00000512844 C1RP00736 705 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 IL1R1P14778 569 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 DRD4P21917 467 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 PRIM2P49643 509 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 PGDP52209 483 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 ZNF543Q08ER8 600 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 ZNF750Q32MQ0 723 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 MTHFD1LQ6UB35 978 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 KCTD20Q7Z5Y7 419 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 AMIGO2Q86SJ2 522 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 CCDC146Q8IYE0 955 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 SIRT6Q8N6T7 355 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 ATP11CQ8NB49 1132 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 ZC3H10Q96K80 434 aaKnown RBP6.42□□□□□ -1.38
CHD1-209ENST00000512844 SEMA4GQ9NTN9 838 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 TFCP2L1Q9NZI6 479 aa6.42□□□□□ -1.38
CHD1-209ENST00000512844 F8W8V4 182 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 APOL1O14791 398 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 HNRNPCP07910 306 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD1-209ENST00000512844 CD19P15391 556 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 WT1P19544 449 aaPredicted RBP6.41□□□□□ -1.38
CHD1-209ENST00000512844 BTF3P20290 206 aaKnown RBP6.41□□□□□ -1.38
CHD1-209ENST00000512844 CLK3P49761 638 aaKnown RBP6.41□□□□□ -1.38
CHD1-209ENST00000512844 AK2P54819 239 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 HDAC1Q13547 482 aaPredicted RBP6.41□□□□□ -1.38
CHD1-209ENST00000512844 LY6KQ17RY6 165 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 PLAG1Q6DJT9 500 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 DPP9Q86TI2 863 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 ACRBPQ8NEB7 543 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 SARAFQ96BY9 339 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 LRRC46Q96FV0 321 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 VN1R3Q9BXE9 311 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 MAGEB5Q9BZ81 275 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 DUSP22Q9NRW4 184 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 DLL3Q9NYJ7 618 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 RGS17Q9UGC6 210 aaPredicted RBP6.41□□□□□ -1.38
CHD1-209ENST00000512844 ADAMTS5Q9UNA0 930 aa6.41□□□□□ -1.38
CHD1-209ENST00000512844 DRG1Q9Y295 367 aaKnown RBP6.41□□□□□ -1.38
CHD1-209ENST00000512844 KAT6AQ92794 2004 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 H0YIZ8 118 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 CES2O00748 559 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 IGLV2-14P01704 120 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 IFIT2P09913 472 aaKnown RBP6.4□□□□□ -1.38
CHD1-209ENST00000512844 SLC5A1P13866 664 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 UQCRC1P31930 480 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 PTH2RP49190 550 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 GATMP50440 423 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 CASP5P51878 434 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 NANOS3P60323 173 aaKnown RBP6.4□□□□□ -1.38
CHD1-209ENST00000512844 NPY5RQ15761 445 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 RRAGBQ5VZM2 374 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 IL31Q6EBC2 164 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms