RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
RFC1-214ENST00000512726 ARTNQ5T4W7 220 aa8.28□□□□□ -1.08
RFC1-214ENST00000512726 SPATA31D4Q6ZUB0 917 aa8.28□□□□□ -1.08
RFC1-214ENST00000512726 C1orf131Q8NDD1 294 aaKnown RBP8.28□□□□□ -1.08
RFC1-214ENST00000512726 DNAJB14Q8TBM8 379 aa8.28□□□□□ -1.08
RFC1-214ENST00000512726 ST8SIA4Q92187 359 aa8.28□□□□□ -1.08
RFC1-214ENST00000512726 NUDT22Q9BRQ3 303 aa8.28□□□□□ -1.08
RFC1-214ENST00000512726 TTPALQ9BTX7 342 aa8.28□□□□□ -1.08
RFC1-214ENST00000512726 UNKLQ9H9P5 680 aaKnown RBP8.28□□□□□ -1.08
RFC1-214ENST00000512726 HECAQ9UBI9 543 aaPredicted RBP8.28□□□□□ -1.08
RFC1-214ENST00000512726 FAM90A18PA6NE21 464 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 FAM90A16PA6NEW6 464 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 FAM90A9PA6NNJ1 464 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 FAM90A5PA8MXJ8 464 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 CNPP09543 421 aaKnown RBP8.27□□□□□ -1.09
RFC1-214ENST00000512726 FAM90A15PP0C7V4 464 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 FAM90A14PP0C7W9 464 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 HK1P19367 917 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 ITGALP20701 1170 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 SERPINA4P29622 427 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 PRKAR1BP31321 381 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 PTCHD3Q3KNS1 767 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 NEK10Q6ZWH5 1172 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 FASTKD5Q7L8L6 764 aaKnown RBP8.27□□□□□ -1.09
RFC1-214ENST00000512726 USP38Q8NB14 1042 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 MBD3L2Q8NHZ7 208 aaPredicted RBP8.27□□□□□ -1.09
RFC1-214ENST00000512726 C7orf26Q96N11 449 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 BARD1Q99728 777 aaKnown RBP8.27□□□□□ -1.09
RFC1-214ENST00000512726 CHCHD6Q9BRQ6 235 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
RFC1-214ENST00000512726 CXorf36Q9H7Y0 433 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 NFU1Q9UMS0 254 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 MRPS17Q9Y2R5 130 aaKnown RBP8.27□□□□□ -1.09
RFC1-214ENST00000512726 KCTD3Q9Y597 815 aa8.27□□□□□ -1.09
RFC1-214ENST00000512726 TFRCP02786 760 aaKnown RBP8.26□□□□□ -1.09
RFC1-214ENST00000512726 INHBBP09529 407 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 ZEB1P37275 1124 aaPredicted RBP8.26□□□□□ -1.09
RFC1-214ENST00000512726 RPS19P39019 145 aaKnown RBP8.26□□□□□ -1.09
RFC1-214ENST00000512726 CDK7P50613 346 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 CASP6P55212 293 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 NUCB1Q02818 461 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 CSHL1Q14406 222 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 SMAD1Q15797 465 aaKnown RBP8.26□□□□□ -1.09
RFC1-214ENST00000512726 ZNF385BQ569K4 471 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 SLC45A4Q5BKX6 768 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 ATG16L1Q676U5 607 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 BRINP3Q76B58 766 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 ZUFSPQ96AP4 578 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 TMEM176AQ96HP8 235 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 HIST1H2AAQ96QV6 131 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 LMF1Q96S06 567 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 SMOC2Q9H3U7 446 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 SEC61A2Q9H9S3 476 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 VPS51Q9UID3 782 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 NDRG4Q9ULP0 352 aaKnown RBP8.26□□□□□ -1.09
RFC1-214ENST00000512726 USP22Q9UPT9 525 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 CNTN6Q9UQ52 1028 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 NEU2Q9Y3R4 380 aa8.26□□□□□ -1.09
RFC1-214ENST00000512726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
RFC1-214ENST00000512726 E7ENX8 843 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TSPAN3O60637 253 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TAF5LO75529 589 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 RTN3O95197 1032 aaPredicted RBP8.25□□□□□ -1.09
RFC1-214ENST00000512726 HNRNPA1P09651 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
RFC1-214ENST00000512726 PGDP52209 483 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TAP2Q03519 686 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.25□□□□□ -1.09
RFC1-214ENST00000512726 E2F2Q14209 437 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 GRM7Q14831 915 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 ELAVL1Q15717 326 aaKnown RBP8.25□□□□□ -1.09
RFC1-214ENST00000512726 CERCAMQ5T4B2 595 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 AGAP9Q5VTM2 703 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TSHZ3Q63HK5 1081 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 C16orf54Q6UWD8 224 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 PLEKHH3Q7Z736 793 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 ELOA2Q8IYF1 753 aaPredicted RBP8.25□□□□□ -1.09
RFC1-214ENST00000512726 MDGA1Q8NFP4 955 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 LRIG1Q96JA1 1093 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TREX2Q9BQ50 279 aaPredicted RBP8.25□□□□□ -1.09
RFC1-214ENST00000512726 REEP2Q9BRK0 252 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 AGXT2Q9BYV1 514 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 RNPEPQ9H4A4 650 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 GBA2Q9HCG7 927 aaPredicted RBP8.25□□□□□ -1.09
RFC1-214ENST00000512726 FSCN3Q9NQT6 498 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TBX20Q9UMR3 447 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 JAG2Q9Y219 1238 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 LMTK3Q96Q04 1460 aa8.25□□□□□ -1.09
RFC1-214ENST00000512726 TOR1BO14657 336 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 ZBED4O75132 1171 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 GFPT2O94808 682 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 HLA-DOAP06340 250 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 MED14OSP0DP75 135 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 HGFP14210 728 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 PPIFP30405 207 aaKnown RBP8.24□□□□□ -1.09
RFC1-214ENST00000512726 RBM5P52756 815 aaKnown RBP eCLIP8.24□□□□□ -1.09
RFC1-214ENST00000512726 DCAF7P61962 342 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 CCNIQ14094 377 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 CTXN3Q4LDR2 81 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms