RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CPQQ9Y646 472 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 OBSL1O75147 1896 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 LOC400499M0QZD8 3231 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 ANKRD63C9JTQ0 380 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 ITGB3P05106 788 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 HOXB2P14652 356 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 GABRG2P18507 467 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 POLR2BP30876 1174 aaKnown RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 GRIK1P39086 918 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 MAGEA11P43364 429 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 TOB1P50616 345 aaPredicted RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 SLC7A9P82251 487 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 ZXDBP98169 803 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 TFAMQ00059 246 aaKnown RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 GAD2Q05329 585 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 SLC39A4Q6P5W5 647 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 RHBDF2Q6PJF5 856 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 GPBP1Q86WP2 473 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 SETD7Q8WTS6 366 aaKnown RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 SPATA17Q96L03 361 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 SMPD4Q9NXE4 827 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 CALCOCO1Q9P1Z2 691 aa13.44□□□□□ -0.26
DDX41-215ENST00000512431 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
DDX41-215ENST00000512431 TNRC6BQ9UPQ9 1833 aaKnown RBP13.43□□□□□ -0.26
DDX41-215ENST00000512431 IGHV1OR15-9A0A0B4J2B8 117 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 TBCAO75347 108 aaKnown RBP13.43□□□□□ -0.26
DDX41-215ENST00000512431 ANK1P16157 1881 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 NTSR1P30989 418 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 GTF2BQ00403 316 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 MESP2Q0VG99 397 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 DHX8Q14562 1220 aaKnown RBP13.43□□□□□ -0.26
DDX41-215ENST00000512431 POSTNQ15063 836 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
DDX41-215ENST00000512431 WDR45BQ5MNZ6 344 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 GLRX5Q86SX6 157 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 ADGRF2Q8IZF7 708 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 LRRC52Q8N7C0 313 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 POMGNT1Q8WZA1 660 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 FOXJ1Q92949 421 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 PKMYT1Q99640 499 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 KIF2CQ99661 725 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 CFAP97Q9P2B7 532 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 DEC1Q9P2X7 70 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 DKK4Q9UBT3 224 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
DDX41-215ENST00000512431 SCN1AP35498 2009 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 MYH11P35749 1972 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 SCAMP3O14828 347 aaKnown RBP13.42□□□□□ -0.26
DDX41-215ENST00000512431 GJB3O75712 270 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 KRT19P08727 400 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 MBL2P11226 248 aaPredicted RBP13.42□□□□□ -0.26
DDX41-215ENST00000512431 ZNF131P52739 623 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 C12orf40Q86WS4 652 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 CSGALNACT2Q8N6G5 542 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 TOP6BLQ8N6T0 577 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 NAT16Q8N8M0 369 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 ADAM32Q8TC27 787 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 OTUB2Q96DC9 234 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 CALML4Q96GE6 196 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
DDX41-215ENST00000512431 GDAP2Q9NXN4 497 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 CYP8B1Q9UNU6 501 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 STYXL1Q9Y6J8 313 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 TCHHQ07283 1943 aa13.42□□□□□ -0.26
DDX41-215ENST00000512431 GCN1Q92616 2671 aaKnown RBP13.41□□□□□ -0.26
DDX41-215ENST00000512431 PTPRDP23468 1912 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 ADAMTS9Q9P2N4 1935 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 E2F8A0AVK6 867 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 GABRDO14764 452 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 TRIM66O15016 1216 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
DDX41-215ENST00000512431 PLCG1P19174 1290 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 BDNFP23560 247 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 WASP42768 502 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 RBP5P82980 135 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 CYP27A1Q02318 531 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 ST3GAL1Q11201 340 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 LY6G5CQ5SRR4 150 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 C10orf76Q5T2E6 689 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 TDRD10Q5VZ19 366 aaKnown RBP13.41□□□□□ -0.26
DDX41-215ENST00000512431 CRELD2Q6UXH1 353 aaPredicted RBP13.41□□□□□ -0.26
DDX41-215ENST00000512431 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 TMPRSS7Q7RTY8 843 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 SLCO6A1Q86UG4 719 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 GALNT15Q8N3T1 639 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 ZNF419Q96HQ0 510 aaPredicted RBP13.41□□□□□ -0.26
DDX41-215ENST00000512431 SLITRK1Q96PX8 696 aa13.41□□□□□ -0.26
DDX41-215ENST00000512431 UBL7Q96S82 380 aaPredicted RBP13.41□□□□□ -0.26
DDX41-215ENST00000512431 ITGA11Q9UKX5 1188 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms