RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 IRF2BPLQ9H1B7 796 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 VPS16Q9H269 839 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 CRISPLD1Q9H336 500 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 MFSD1Q9H3U5 465 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 TSPY26PQ9H489 355 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 KCNK12Q9HB15 430 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 CSNK1G1Q9HCP0 422 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 TRPC7Q9HCX4 862 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 PLCB1Q9NQ66 1216 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 TAB2Q9NYJ8 693 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 DNAJC12Q9UKB3 198 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 STRIP2Q9ULQ0 834 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
NR1I3-231ENST00000512340 TSC2P49815 1807 aa7.89□□□□□ -1.15
NR1I3-231ENST00000512340 MYO10Q9HD67 2058 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 NCANO14594 1321 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 FAM86C2PA6NEL3 165 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 LRRC10BA6NIK2 292 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ANHXE9PGG2 379 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 CLDN5O00501 218 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 STK25O00506 426 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SLC9A3R1O14745 358 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ZNF263O14978 683 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 XPO1O14980 1071 aaKnown RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 THAP12O43422 761 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 CBFA2T2O43439 604 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 FBXO21O94952 628 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 VNN2O95498 520 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TPM1P09493 284 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SRFP11831 508 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 CCDC130P13994 396 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 HMGA1P17096 107 aaKnown RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 CEBPBP17676 345 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 PSMC3P17980 439 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 HDCP19113 662 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SLC9A1P19634 815 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ACO1P21399 889 aaKnown RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 GNA15P30679 374 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TUBP50607 506 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SLC5A3P53794 718 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ZXDAP98168 799 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SIGLEC14Q08ET2 396 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 IFRD2Q12894 506 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 NR1H3Q13133 447 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ORC1Q13415 861 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 HTR4Q13639 388 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ZNF268Q14587 947 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 GOLGA7BQ2TAP0 167 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ARHGAP29Q52LW3 1261 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 PPP1R26Q5T8A7 1209 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SDHAF4Q5VUM1 108 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 LCLAT1Q6UWP7 414 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 RSRC2Q7L4I2 434 aaKnown RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TMC8Q8IU68 726 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SUGP1Q8IWZ8 645 aaKnown RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 HS6ST3Q8IZP7 471 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 CMTM8Q8IZV2 173 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 KIAA1958Q8N8K9 716 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 C12orf29Q8N999 325 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SLC4A11Q8NBS3 891 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ZNF397Q8NF99 534 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 LMO3Q8TAP4 145 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 CSGALNACT1Q8TDX6 532 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 EDAQ92838 391 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 MSANTD3Q96H12 275 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 MED15Q96RN5 788 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 NUP58Q9BVL2 599 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TTLL2Q9BWV7 592 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 LSM14BQ9BX40 385 aaKnown RBP7.88□□□□□ -1.15
NR1I3-231ENST00000512340 STK33Q9BYT3 514 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SYNCQ9H7C4 482 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 BRD9Q9H8M2 597 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TRPV4Q9HBA0 871 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TDP1Q9NUW8 608 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 TMEM51Q9NW97 253 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 SCML2Q9UQR0 700 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 NUMBLQ9Y6R0 609 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 ZNF318Q5VUA4 2279 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 C2orf16Q68DN1 1984 aa7.88□□□□□ -1.15
NR1I3-231ENST00000512340 M0QYV0 167 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 NCAM2O15394 837 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 HCRTO43612 131 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 F11P03951 625 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 GLULP15104 373 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 UCHL3P15374 230 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 ZNF18P17022 549 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 ATP5C1P36542 298 aaKnown RBP7.87□□□□□ -1.15
NR1I3-231ENST00000512340 STAT1P42224 750 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 GPR15P49685 360 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 PTPN5P54829 565 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 TAF10Q12962 218 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 SLC5A9Q2M3M2 681 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 TSR1Q2NL82 804 aaKnown RBP7.87□□□□□ -1.15
NR1I3-231ENST00000512340 FAM78AQ5JUQ0 283 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 MIIPQ5JXC2 388 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 KLHDC7AQ5VTJ3 777 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 SCARA3Q6AZY7 606 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 PHLDB3Q6NSJ2 640 aa7.87□□□□□ -1.15
NR1I3-231ENST00000512340 PPP1R2P3Q6NXS1 205 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms