RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 NDUFA10O95299 355 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 LRG1P02750 347 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 SERPING1P05155 500 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 CCDC172P0C7W6 258 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 GJA1P17302 382 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 AXLP30530 894 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 CCR2P41597 374 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 KLK7P49862 253 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TERF1P54274 439 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 KRT83P78385 493 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PPP3CAQ08209 521 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 RAB33AQ14088 237 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 ZACNQ401N2 412 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PLK5Q496M5 336 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PRSS36Q5K4E3 855 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 DGKKQ5KSL6 1271 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TCERG1LQ5VWI1 586 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PKN3Q6P5Z2 889 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TXNDC11Q6PKC3 985 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 ENOSF1Q7L5Y1 443 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 APBB1IPQ7Z5R6 666 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PROSER1Q86XN7 944 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 NT5DC4Q86YG4 428 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TXLNBQ8N3L3 684 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 CPLX3Q8WVH0 158 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 HNRNPLLQ8WVV9 542 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PPP1R13BQ96KQ4 1090 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TSPAN18Q96SJ8 248 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 CGRRF1Q99675 332 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TRIM6Q9C030 488 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 HAPLN2Q9GZV7 340 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 PCIF1Q9H4Z3 704 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 TMEM9BQ9NQ34 198 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 POLR3BQ9NW08 1133 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 CPSF3Q9UKF6 684 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 SPAARA0A1B0GVQ0 90 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 SOWAHDA6NJG2 315 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 PATE3B3GLJ2 98 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 DCLK1O15075 740 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 B4GALT5O43286 388 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 KIF4AO95239 1232 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 POU2F2P09086 479 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 SLC9A1P19634 815 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 CSRP1P21291 193 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 HOXA6P31267 233 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 POLR2FP61218 127 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 GCNT1Q02742 428 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 GRIK3Q13003 919 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 PRPF4BQ13523 1007 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 WDR49Q8IV35 697 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 CD302Q8IX05 232 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 YAF2Q8IY57 180 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 FBXL13Q8NEE6 735 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 SMARCD2Q92925 531 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 MSTO1Q9BUK6 570 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 INTS2Q9H0H0 1204 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 DUSP15Q9H1R2 295 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 SLC8A2Q9UPR5 921 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 CDY1Q9Y6F8 540 aa11.17□□□□□ -0.62
PDLIM5-217ENST00000512274 IGF2RP11717 2491 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 SPECC1L-ADORA2AF8WAN1 911 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 CDX4O14627 284 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 TSPAN1O60635 241 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 IL18RAPO95256 599 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 C4BPAP04003 597 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 PRB1P04280 392 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 TRIM49P0CI25 452 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 TRIM49CP0CI26 452 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 FERP16591 822 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 IGFBP6P24592 240 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 DLG4P78352 724 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 DCAF4L1Q3SXM0 396 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 PDZD4Q76G19 769 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 SV2AQ7L0J3 742 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 RRAGAQ7L523 313 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 IRF2BP2Q7Z5L9 587 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 MFSD6LQ8IWD5 586 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 ZSCAN18Q8TBC5 510 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 LRIG1Q96JA1 1093 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 ZC3H10Q96K80 434 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 CHP1Q99653 195 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 CRACR2AQ9BSW2 395 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
PDLIM5-217ENST00000512274 ASB7Q9H672 318 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms