RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SMTNL2Q2TAL5 461 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ANKRD13AQ8IZ07 590 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 MRPL39Q9NYK5 338 aaKnown RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 GTF3C4Q9UKN8 822 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 RNF103O00237 685 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 CCDC22O60826 627 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 DDNO94850 711 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ITGB5P18084 799 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 TAC1P20366 129 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 AP1S2P56377 157 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ACAD10Q6JQN1 1059 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 UBASH3BQ8TF42 649 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ATG4AQ8WYN0 398 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 GCOM2Q9BZD3 368 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 OSBPL8Q9BZF1 889 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 MTMR12Q9C0I1 747 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 EMC3Q9P0I2 261 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 BIRC5O15392 142 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 CUL2Q13617 745 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 LONRF1Q17RB8 773 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 IER5Q5VY09 327 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 KLHL17Q6TDP4 642 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 FBXO16Q8IX29 292 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-209ENST00000512055 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ZSWIM1Q9BR11 485 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 MTFR1LQ9H019 292 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
CPNE4-209ENST00000512055 ASTN1O14525 1302 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 YDJCA8MPS7 323 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 PPP1R37O75864 691 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 DSG3P32926 999 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 BCAP31P51572 246 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ARPP19P56211 112 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 CYP24A1Q07973 514 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 CREG2Q8IUH2 290 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ZNF786Q8N393 782 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 BAP1Q92560 729 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 NOD2Q9HC29 1040 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ACP6Q9NPH0 428 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ATAD3AQ9NVI7 634 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 STON1Q9Y6Q2 735 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 CCDC162PA2VCL2 907 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 E7ENQ6 273 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 CDH2P19022 906 aaPredicted RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ADARP55265 1226 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 CAV1Q03135 178 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 EFR3AQ14156 821 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 TAF1BQ53T94 588 aaPredicted RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 METTL23Q86XA0 190 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ANKMY2Q8IV38 441 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 C1orf131Q8NDD1 294 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SCFD2Q8WU76 684 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 KAT5Q92993 513 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 RERGLQ9H628 205 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SPEF2Q9C093 1822 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SLC25A27O95847 323 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 RALAP11233 206 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ACADSP16219 412 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 HSD17B3P37058 310 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ALDH18A1P54886 795 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SNAPC2Q13487 334 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 LBRQ14739 615 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 KCTD19Q17RG1 926 aaPredicted RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 P3H1Q32P28 736 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 LAYNQ6UX15 382 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SPATA21Q7Z572 469 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 AGGF1Q8N302 714 aaeCLIP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 AGR3Q8TD06 166 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 CEP44Q9C0F1 390 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 VPS11Q9H270 941 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ATP6V1HQ9UI12 483 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 PHRF1Q9P1Y6 1649 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 RRM1P23921 792 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SEC24CP53992 1094 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 BCAR1P56945 870 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 SLC13A5Q86YT5 568 aaPredicted RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 P3H2Q8IVL5 708 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ZNF473Q8WTR7 871 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 HSD17B14Q9BPX1 270 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 REXO4Q9GZR2 422 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 KCTD10Q9H3F6 313 aa11.24□□□□□ -0.61
CPNE4-209ENST00000512055 DHX35Q9H5Z1 703 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
CPNE4-209ENST00000512055 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 KPNA4O00629 521 aaPredicted RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 VHLP40337 213 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
CPNE4-209ENST00000512055 SERPINB8P50452 374 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
CPNE4-209ENST00000512055 ARHGEF6Q15052 776 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms