RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MIB1Q86YT6 1006 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 PGBD3Q8N328 593 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 CDK5RAP3Q96JB5 506 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 ZHX3Q9H4I2 956 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 CD93Q9NPY3 652 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 CRTAC1Q9NQ79 661 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 ARHGEF4Q9NR80 690 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 CPQQ9Y646 472 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 ZNF840PA6NDX5 716 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 HUS1O60921 280 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 SEC24BO95487 1268 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 OLFM2O95897 454 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 APODP05090 189 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 FTH1P19P0C7X4 201 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 LMO2P25791 158 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 PNPLA4P41247 253 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 PSMC1P62191 440 aaKnown RBP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 HMGN5P82970 282 aaKnown RBP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 ZNF33AQ06730 810 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 KCNA1Q09470 495 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 RESTQ13127 1097 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 TRIP6Q15654 476 aaKnown RBP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 HSF5Q4G112 596 aaPredicted RBP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 LMBRD2Q68DH5 695 aaPredicted RBP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 ADGRF2Q8IZF7 708 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 TMEM86AQ8N2M4 240 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 CEP76Q8TAP6 659 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 HNRNPLLQ8WVV9 542 aaKnown RBP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 ADAMTS14Q8WXS8 1223 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 MYLPFQ96A32 169 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 ERLEC1Q96DZ1 483 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 FUBP3Q96I24 572 aaKnown RBP eCLIP20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 CD248Q9HCU0 757 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 GDAP2Q9NXN4 497 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 CALCOCO1Q9P1Z2 691 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 SNX9Q9Y5X1 595 aa20.35■□□□□ 0.85
HMGCS1-206ENST00000511774 CFAP46Q8IYW2 2715 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 IGHV1OR15-9A0A0B4J2B8 117 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 TRIM24O15164 1050 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 AP5Z1O43299 807 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 SCP2P22307 547 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 EIF2DP41214 584 aaKnown RBP20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 GRIA2P42262 883 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 POU5F1Q01860 360 aaKnown RBP20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 KBTBD7Q8WVZ9 684 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 POMGNT1Q8WZA1 660 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 SPATA17Q96L03 361 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 TTLL2Q9BWV7 592 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 TMEM30AQ9NV96 361 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 TRPM5Q9NZQ8 1165 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 CFAP97Q9P2B7 532 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 RAXQ9Y2V3 346 aa20.34■□□□□ 0.85
HMGCS1-206ENST00000511774 PPP1R37O75864 691 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 IL18RAPO95256 599 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 OAS1P00973 400 aaKnown RBP20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 ADH5P11766 374 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 BDNFP23560 247 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 DPP6P42658 865 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 WASP42768 502 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 TNFRSF4P43489 277 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 GRIN1Q05586 938 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 LY6G5CQ5SRR4 150 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 SLFN12LQ6IEE8 588 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 LIMS2Q7Z4I7 341 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 SLCO6A1Q86UG4 719 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 NT5DC4Q86YG4 428 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 ETFBKMTQ8IXQ9 262 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 SAAL1Q96ER3 474 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 FAM213AQ9BRX8 229 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 ST6GALNAC4Q9H4F1 302 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 CCDC86Q9H6F5 360 aaKnown RBP20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 NME7Q9Y5B8 376 aa20.33■□□□□ 0.85
HMGCS1-206ENST00000511774 MAST4O15021 2626 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 A0A1W2PQF6 199 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 TULP1O00294 542 aaPredicted RBP20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 RDXP35241 583 aaKnown RBP20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 CACNA2D1P54289 1103 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 BYSLQ13895 437 aaKnown RBP20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 DENND5BQ6ZUT9 1274 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 MARCH9Q86YJ5 346 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 BRSK2Q8IWQ3 736 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 CSGALNACT2Q8N6G5 542 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 LRRC52Q8N7C0 313 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 NAT16Q8N8M0 369 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 RAD54LQ92698 747 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 WBP2Q969T9 261 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 CRELD1Q96HD1 420 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 ZFRQ96KR1 1074 aaKnown RBP20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 HSPA12BQ96MM6 686 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 SYT15Q9BQS2 421 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 STRA6Q9BX79 667 aa20.32■□□□□ 0.84
HMGCS1-206ENST00000511774 CABIN1Q9Y6J0 2220 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 PFKLP17858 780 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 PCSK1P29120 753 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 LHX1P48742 406 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 ZNF720Q7Z2F6 126 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 SFR1Q86XK3 245 aa20.31■□□□□ 0.84
HMGCS1-206ENST00000511774 NAXDQ8IW45 347 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms