RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 FAM49BQ9NUQ9 324 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 CACNA1IQ9P0X4 2223 aa17.1■□□□□ 0.33
PDLIM5-216ENST00000511767 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 ZDHHC11BP0C7U3 371 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 RFX1P22670 979 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 ADORA2BP29275 332 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 PTPN5P54829 565 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 ZXDBP98169 803 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 LRMPQ12912 555 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 CUL2Q13617 745 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 CLEC20AQ6ZU45 233 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 UBR7Q8N806 425 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 GPT2Q8TD30 523 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 CSGALNACT1Q8TDX6 532 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 FAM122AQ96E09 287 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 DUSP16Q9BY84 665 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 KIF9Q9HAQ2 790 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 KRT82Q9NSB4 513 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 GTSE1Q9NYZ3 720 aa17.09■□□□□ 0.33
PDLIM5-216ENST00000511767 ANAPC1Q9H1A4 1944 aa17.08■□□□□ 0.33
PDLIM5-216ENST00000511767 H0Y858 1186 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 TCF3P15923 654 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 PLA2G5P39877 138 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 PGFP49763 221 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 NHLH1Q02575 133 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 TNK2Q07912 1038 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 UBXN2BQ14CS0 331 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 OVCA2Q8WZ82 227 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 FAM3CQ92520 227 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 SLITRK1Q96PX8 696 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 UBXN6Q9BZV1 441 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 NUP62CLQ9H1M0 184 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 C8orf33Q9H7E9 229 aaPredicted RBP17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 MRPS17Q9Y2R5 130 aaKnown RBP17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 PIAS3Q9Y6X2 628 aa17.08■□□□□ 0.32
PDLIM5-216ENST00000511767 KMT2EQ8IZD2 1858 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 OTOL1A6NHN0 477 aaPredicted RBP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 OLFM2O95897 454 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 ABL1P00519 1130 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 CKMP06732 381 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 FAM200BP0CF97 657 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 TRIM21P19474 475 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 SLC5A3P53794 718 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 SLC7A9P82251 487 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 CETN1Q12798 172 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 IFRD2Q12894 506 aaPredicted RBP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 ZNF77Q15935 545 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 ARHGAP17Q68EM7 881 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 TTC8Q8TAM2 541 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 FBXO32Q969P5 355 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 IRF2BPLQ9H1B7 796 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 LINC00597Q9H2U6 94 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 HPS4Q9NQG7 708 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 KIAA1257Q9ULG3 409 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 ZNF638Q14966 1978 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 COL4A3Q01955 1670 aa17.07■□□□□ 0.32
PDLIM5-216ENST00000511767 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 NCAM2O15394 837 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 AFPP02771 609 aaKnown RBP17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 SOX9P48436 509 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 PDE6CP51160 858 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 KPNA1P52294 538 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 KIF11P52732 1056 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 RUNX3Q13761 415 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 DPCR1Q3MIW9 517 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 TRIM68Q6AZZ1 485 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 RALGPS2Q86X27 583 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 ANKRD52Q8NB46 1076 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 PDZD8Q8NEN9 1154 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 SH3RF2Q8TEC5 729 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 NT5C1BQ96P26 610 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 FBXO44Q9H4M3 255 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 EBF3Q9H4W6 596 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 LMAN1LQ9HAT1 526 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 USP3Q9Y6I4 520 aa17.06■□□□□ 0.32
PDLIM5-216ENST00000511767 SPECC1L-ADORA2AF8WAN1 911 aa17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 CHRNB1P11230 501 aa17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 TBXAS1P24557 533 aaPredicted RBP17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 RPS9P46781 194 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 YWHAEP62258 255 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 MTF1Q14872 753 aa17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 PDGFRLQ15198 375 aa17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
PDLIM5-216ENST00000511767 TXNDC11Q6PKC3 985 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms