RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CLCA4Q14CN2 919 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 SMAD1Q15797 465 aaKnown RBP6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 ANKRD45Q5TZF3 282 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 SPOCD1Q6ZMY3 1216 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CLNKQ7Z7G1 428 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 SPARTQ8N0X7 666 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 TSPYL6Q8N831 410 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 MB21D1Q8N884 522 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 NSUN7Q8NE18 718 aaKnown RBP6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 DNAJB14Q8TBM8 379 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 GNRHR2Q96P88 292 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 TWNKQ96RR1 684 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 MNTQ99583 582 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 SLC26A6Q9BXS9 759 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 FSCN3Q9NQT6 498 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 PPP4R1LQ9P1A2 415 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 GXYLT2A0PJZ3 443 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 MYADML2A6NDP7 307 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 MARCH11A6NNE9 402 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 GRXCR1A8MXD5 290 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 GOLGA6L6A8MZA4 724 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 ADM5C9JUS6 153 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 hCG_1984214I3L0E3 225 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 NUAK1O60285 661 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 BAIAP3O94812 1187 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 CD4P01730 458 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 CNPP09543 421 aaKnown RBP6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 CNTFP26441 200 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 KLRK1P26718 216 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 LIFRP42702 1097 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 AARSP49588 968 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 NDUFV1P49821 464 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 ADAM17P78536 824 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 MC2RQ01718 297 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 CHRNDQ07001 517 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 TRPC3Q13507 836 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 GRM4Q14833 912 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 PTCHD3Q3KNS1 767 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAAH2Q6GMR7 532 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 SLC30A10Q6XR72 485 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 WDR60Q8WVS4 1066 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 GRAMD1AQ96CP6 724 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 PHACTR3Q96KR7 559 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 KCNC2Q96PR1 638 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 TRAPPC9Q96Q05 1148 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 PAAF1Q9BRP4 392 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 TTPALQ9BTX7 342 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 VPS16Q9H269 839 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 JMJD4Q9H9V9 463 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 VPS45Q9NRW7 570 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 RXFP3Q9NSD7 469 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 ZFR2Q9UPR6 939 aaKnown RBP6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 SSX2IPQ9Y2D8 614 aa6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 MRPS17Q9Y2R5 130 aaKnown RBP6.24□□□□□ -1.41
HMGB1P47-201ENST00000511281 A6NLC8 198 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 EFCAB8A8MWE9 144 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 F5H0A9 414 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 J3KTA2 159 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 TRIM24O15164 1050 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 RGS10O43665 173 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 SNX2O60749 519 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 GPANK1O95872 356 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 TFRCP02786 760 aaKnown RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 LDHCP07864 332 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 SRGAP2BP0DMP2 458 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 JUPP14923 745 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 UQCRC1P31930 480 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 APOBEC3AP31941 199 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 HTR7P34969 479 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 PDE6CP51160 858 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 PRKAG1P54619 331 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 RPS7P62081 194 aaKnown RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 NRN1LQ496H8 165 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 MZT2BQ6NZ67 158 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 MAMDC4Q6UXC1 1216 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 MICALCLQ6ZW33 695 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 MAPKAPK5Q8IW41 473 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 SLC15A3Q8IY34 581 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 ADGRG5Q8IZF4 528 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 USP38Q8NB14 1042 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 SUN3Q8TAQ9 357 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 HTRA1Q92743 480 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 FUBP1Q96AE4 644 aaKnown RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 BOD1Q96IK1 185 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 OSBPL5Q9H0X9 879 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 TAF1DQ9H5J8 278 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 TRIM36Q9NQ86 728 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 TMEM74BQ9NUR3 256 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 NDUFAF4Q9P032 175 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 RNF181Q9P0P0 153 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 FBXO2Q9UK22 296 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 CNTN6Q9UQ52 1028 aa6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 USP15Q9Y4E8 981 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P47-201ENST00000511281 PNMA6EA0A0J9YXQ4 647 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 TOR1BO14657 336 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 ZNF185O15231 689 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 CYP27B1O15528 508 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 FOXS1O43638 330 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 TAF5LO75529 589 aa6.22□□□□□ -1.41
HMGB1P47-201ENST00000511281 DDX58O95786 925 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms