RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RAPGEF1Q13905 1077 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 MAPRE1Q15691 268 aaKnown RBP16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 GPR158Q5T848 1215 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 ENOSF1Q7L5Y1 443 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 ITIH5Q86UX2 942 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 SPATA2LQ8IUW3 424 aaPredicted RBP16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 NEK11Q8NG66 645 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 SHC3Q92529 594 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 LRRC3BQ96PB8 259 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 FOXQ1Q9C009 403 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 ABCB6Q9NP58 842 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 TMEM30AQ9NV96 361 aa16.48■□□□□ 0.23
SH3TC1-220ENST00000511002 ANAPC1Q9H1A4 1944 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 A0A1W2PQC6 194 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 HEPACAM2A8MVW5 462 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 PRAMEF12O95522 483 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 F11P03951 625 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 RFX1P22670 979 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 BDNFP23560 247 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 PBX1P40424 430 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 CLCN5P51795 746 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 POLR2FP61218 127 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 NHLH1Q02575 133 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 DRAP1Q14919 205 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 CFAP221Q4G0U5 840 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 C4orf50Q6ZRC1 276 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 PAQR9Q6ZVX9 377 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM35AQ86V20 835 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 ARID3BQ8IVW6 561 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 FUKQ8N0W3 1084 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 SLC2A14Q8TDB8 520 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 JAKMIP2Q96AA8 810 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM122AQ96E09 287 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM81BQ96LP2 452 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 PHOX2BQ99453 314 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 SMG9Q9H0W8 520 aaKnown RBP16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 TRPV4Q9HBA0 871 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 NLRC4Q9NPP4 1024 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 MAGED2Q9UNF1 606 aaPredicted RBP16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 CNTN6Q9UQ52 1028 aa16.47■□□□□ 0.23
SH3TC1-220ENST00000511002 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 SLC38A8A6NNN8 435 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 STK25O00506 426 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 CD19P15391 556 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 CD72P21854 359 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 ADORA2BP29275 332 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 USP8P40818 1118 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 PLCB2Q00722 1185 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 MLF2Q15773 248 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 SLC44A4Q53GD3 710 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 FUBP3Q96I24 572 aaKnown RBP eCLIP16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 MED10Q9BTT4 135 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 SLC46A2Q9BY10 475 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 KCNH6Q9H252 994 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 HEBP1Q9NRV9 189 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 KRT82Q9NSB4 513 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 FAM86C1Q9NVL1 165 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 MTF2Q9Y483 593 aaPredicted RBP16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 MIA3Q5JRA6 1907 aa16.46■□□□□ 0.23
SH3TC1-220ENST00000511002 CACNA1HO95180 2353 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 F5P12259 2224 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 F8VZ95 297 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 FOXN3O00409 490 aaPredicted RBP16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 GALR2O43603 387 aaPredicted RBP16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 DCNP07585 359 aaKnown RBP16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 PAEPP09466 180 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 GLULP15104 373 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 BRD2P25440 801 aaKnown RBP16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 CDC25CP30307 473 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 GDI1P31150 447 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 STARD6P59095 220 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 TAF12Q16514 161 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 PPP1R26Q5T8A7 1209 aaPredicted RBP16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 SARM1Q6SZW1 724 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 RIN3Q8TB24 985 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 TFAP2BQ92481 460 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 ZSWIM1Q9BR11 485 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 TRMT61BQ9BVS5 477 aaKnown RBP16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 TASP1Q9H6P5 420 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
SH3TC1-220ENST00000511002 KIF26AQ9ULI4 1882 aaPredicted RBP16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 H0Y858 1186 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 CYP26A1O43174 497 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 CBFA2T2O43439 604 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 CSH1P0DML2 217 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 CSH2P0DML3 217 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 PSMC3P17980 439 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 TRIM21P19474 475 aaKnown RBP16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 MAGEA11P43364 429 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 JAM2P57087 298 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms