RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 ARL14EPQ8N8R7 260 aaPredicted RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 NDST4Q9H3R1 872 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 NUDT5Q9UKK9 219 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ASS1P00966 412 aaKnown RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 CYP2F1P24903 491 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 CASP4P49662 377 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ATP11AP98196 1134 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SGCGQ13326 291 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SMARCD2Q92925 531 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ARHGAP28Q9P2N2 729 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 RRP15Q9Y3B9 282 aaKnown RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIN54-210ENST00000510877 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 GAD2Q05329 585 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 ZNF235Q14590 738 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 SYT10Q6XYQ8 523 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 B3GALNT2Q8NCR0 500 aa13.07□□□□□ -0.32
LIN54-210ENST00000510877 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
LIN54-210ENST00000510877 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 TGM5O43548 720 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 CALB1P05937 261 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 IRS1P35568 1242 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
LIN54-210ENST00000510877 CDH8P55286 799 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 GRIN1Q05586 938 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 SV2AQ7L0J3 742 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 SLC7A5P2Q9GIP4 190 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 RWDD2AQ9UIY3 292 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 CUL9Q8IWT3 2517 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 A0A0B4J269 797 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 HIDE1A8MVS5 230 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 TBX4P57082 545 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 DAB2P98082 770 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 PKP1Q13835 747 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 PSMD6Q15008 389 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 FAM124AQ86V42 546 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 ARID3BQ8IVW6 561 aaPredicted RBP13.06□□□□□ -0.32
LIN54-210ENST00000510877 TMEM176AQ96HP8 235 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
LIN54-210ENST00000510877 F5P12259 2224 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 NEDD8-MDP1E9PL57 170 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
LIN54-210ENST00000510877 CXCL12P48061 93 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 PPP3CCP48454 512 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 USP4Q13107 963 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 NUGGCQ68CJ6 796 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 UNC93AQ86WB7 457 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 PPFIBP2Q8ND30 876 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 GABPB2Q8TAK5 448 aaPredicted RBP13.06□□□□□ -0.32
LIN54-210ENST00000510877 FAM3CQ92520 227 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 NKD2Q969F2 451 aaPredicted RBP13.06□□□□□ -0.32
LIN54-210ENST00000510877 LENG9Q96B70 501 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 IQCDQ96DY2 449 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 C11orf70Q9BRQ4 267 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 TDP1Q9NUW8 608 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 PRKAG3Q9UGI9 489 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 MTCH2Q9Y6C9 303 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 CLUHO75153 1309 aa13.06□□□□□ -0.32
LIN54-210ENST00000510877 A0A087WUV0 522 aaPredicted RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 DDHD2O94830 711 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 PSMA2P25787 234 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 BST2Q10589 180 aaKnown RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 KIF2CQ99661 725 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 ACBD6Q9BR61 282 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 TACO1Q9BSH4 297 aaKnown RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 ZNF510Q9Y2H8 683 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 TRIM49BA6NDI0 452 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 LZTS3O60299 673 aaPredicted RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 ETFBP38117 255 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 ARL4DP49703 201 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 GHRHRQ02643 423 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 KIF5AQ12840 1032 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 HLTFQ14527 1009 aaKnown RBP eCLIP13.05□□□□□ -0.32
LIN54-210ENST00000510877 CEP85LQ5SZL2 805 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 RETSATQ6NUM9 610 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 WNT8BQ93098 351 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 NFKBIZQ9BYH8 718 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 KPNA3O00505 521 aaPredicted RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 CLASP2O75122 1294 aaKnown RBP13.05□□□□□ -0.32
LIN54-210ENST00000510877 RARGP13631 454 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 ATP4AP20648 1035 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 ITGB8P26012 769 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 KCNQ1P51787 676 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 CUL2Q13617 745 aa13.05□□□□□ -0.32
LIN54-210ENST00000510877 INTS6LQ5JSJ4 861 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms