RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SCAF8Q9UPN6 1271 aaKnown RBP6.25□□□□□ -1.41
NUP54-209ENST00000510569 BTBD19C9JJ37 291 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 AP4M1O00189 453 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 FGAP02671 866 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 ATP5F1P24539 256 aaPredicted RBP6.24□□□□□ -1.41
NUP54-209ENST00000510569 NR4A2P43354 598 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 BCAT1P54687 386 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 PSG6Q00889 435 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 SLC13A2Q13183 592 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 RAB32Q13637 225 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 MLC1Q15049 377 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 Q4G0T1 1027 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 MEX3CQ5U5Q3 659 aaKnown RBP6.24□□□□□ -1.41
NUP54-209ENST00000510569 SERPINA13PQ6UXR4 307 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 SIRT6Q8N6T7 355 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 ZNF398Q8TD17 642 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 TMEM171Q8WVE6 324 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 FYTTD1Q96QD9 318 aaKnown RBP6.24□□□□□ -1.41
NUP54-209ENST00000510569 FAM118BQ9BPY3 351 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 CDH19Q9H159 772 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 KLHL13Q9P2N7 655 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 AMFRQ9UKV5 643 aa6.24□□□□□ -1.41
NUP54-209ENST00000510569 TMEM233B4DJY2 109 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 M0R3H8 397 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 PHGDHO43175 533 aaKnown RBP6.23□□□□□ -1.41
NUP54-209ENST00000510569 RFPL1O75677 317 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 TUSC2O75896 110 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 PDGFRBP09619 1106 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 KITP10721 976 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 GKP32189 559 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 CCT4P50991 539 aaKnown RBP6.23□□□□□ -1.41
NUP54-209ENST00000510569 ALDH5A1P51649 535 aaPredicted RBP6.23□□□□□ -1.41
NUP54-209ENST00000510569 FAM187BQ17R55 369 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 PTCHD3Q3KNS1 767 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 PXDC1Q5TGL8 231 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 AWAT2Q6E213 333 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 EPM2AIP1Q7L775 607 aaPredicted RBP6.23□□□□□ -1.41
NUP54-209ENST00000510569 TECPR1Q7Z6L1 1165 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 ZBTB34Q8NCN2 500 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 IL31RAQ8NI17 732 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 RAPGEF4Q8WZA2 1011 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 MAML1Q92585 1016 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 PPP2R3CQ969Q6 453 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 HMCESQ96FZ2 354 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 GBA2Q9HCG7 927 aaPredicted RBP6.23□□□□□ -1.41
NUP54-209ENST00000510569 XPNPEP3Q9NQH7 507 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 DDX56Q9NY93 547 aaKnown RBP6.23□□□□□ -1.41
NUP54-209ENST00000510569 TFCP2L1Q9NZI6 479 aa6.23□□□□□ -1.41
NUP54-209ENST00000510569 RAB27AP51159 221 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 SUMO2P61956 95 aaKnown RBP6.22□□□□□ -1.41
NUP54-209ENST00000510569 CCNIQ14094 377 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 DCAF12L1Q5VU92 463 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 OVCH2Q7RTZ1 564 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 TPH2Q8IWU9 490 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 LINC01465Q8N7H1 131 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 PRSS3P2Q8NHM4 247 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 ADAMTS18Q8TE60 1221 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 COQ8BQ96D53 544 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 LRGUKQ96M69 825 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 ZNF518BQ9C0D4 1074 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 ZSCAN32Q9NX65 697 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 CDY1Q9Y6F8 540 aa6.22□□□□□ -1.41
NUP54-209ENST00000510569 ANKRD62A6NC57 917 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 TMEM232C9JQI7 657 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 PSMD9O00233 223 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 TRIM38O00635 465 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 FCHO1O14526 889 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 TBC1D4O60343 1298 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 PMPCBO75439 489 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 NTN1O95631 604 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 A1BGP04217 495 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 IL1R2P27930 398 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 FOXG1P55316 489 aaPredicted RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 TIAL1Q01085 375 aaKnown RBP eCLIP6.21□□□□□ -1.42
NUP54-209ENST00000510569 ZNF268Q14587 947 aaPredicted RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 RABEP1Q15276 862 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 C4orf46Q504U0 113 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 COL23A1Q86Y22 540 aaPredicted RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 RAB11FIP4Q86YS3 637 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 SPARTQ8N0X7 666 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 B3GNT5Q9BYG0 378 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 TRIM5Q9C035 493 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 A1CFQ9NQ94 594 aaKnown RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 TRNAU1APQ9NX07 287 aaKnown RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 DRG1Q9Y295 367 aaKnown RBP6.21□□□□□ -1.42
NUP54-209ENST00000510569 AFG3L2Q9Y4W6 797 aa6.21□□□□□ -1.42
NUP54-209ENST00000510569 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 IKBKBO14920 756 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 TBX3O15119 743 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 PHKG2P15735 406 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 PLCD1P51178 756 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 EPHB1P54762 984 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 NPNTQ6UXI9 565 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 PTCHD4Q6ZW05 846 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 MAEAQ7L5Y9 396 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 MICU3Q86XE3 530 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 MPP5Q8N3R9 675 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 OR56A3Q8NH54 315 aa6.2□□□□□ -1.42
NUP54-209ENST00000510569 DNAJB14Q8TBM8 379 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms