RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RNPEPQ9H4A4 650 aa18.75■□□□□ 0.59
CCHCR1-228ENST00000509552 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCHCR1-228ENST00000509552 STK38LQ9Y2H1 464 aa18.75■□□□□ 0.59
CCHCR1-228ENST00000509552 KRT16P08779 473 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 TMEM132DQ14C87 1099 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 RPAINQ86UA6 219 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 ERO1BQ86YB8 467 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 TTC39CQ8N584 583 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 CXorf38Q8TB03 319 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 ZNF75CPQ92670 426 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 RAB3IPQ96QF0 476 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 CYTH2Q99418 400 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 ETNK1Q9HBU6 452 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 TXNRD2Q9NNW7 524 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 A0A087WZ62 844 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 TM9SF1O15321 606 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 MGAMO43451 1857 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 PRPSAP2O60256 369 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 CSDE1O75534 798 aaKnown RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 ALADP13716 330 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 PDGFRAP16234 1089 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 NOMO1Q15155 1222 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 Q3C1V9 767 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 FYB2Q5VWT5 728 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 OR6B2Q6IFH4 312 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 MAP7D3Q8IWC1 876 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 TMEM130Q8N3G9 435 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 ERP27Q96DN0 273 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 FDXACB1Q9BRP7 624 aaPredicted RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 WDR83Q9BRX9 315 aaKnown RBP18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 PDZD7Q9H5P4 517 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 KIAA1257Q9ULG3 409 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 AKT3Q9Y243 479 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 IKBKGQ9Y6K9 419 aa18.74■□□□□ 0.59
CCHCR1-228ENST00000509552 INSRRP14616 1297 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 ZC3H18Q86VM9 953 aaKnown RBP18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 ANKLE1Q8NAG6 615 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 GIMAP7Q8NHV1 300 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 DCAKDQ8WVC6 231 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 RXFP2Q8WXD0 754 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 CPB2Q96IY4 423 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 FAM124BQ9H5Z6 455 aaPredicted RBP18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 ITGA11Q9UKX5 1188 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 CHMP2BQ9UQN3 213 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 ADM5C9JUS6 153 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 H7C0C1 242 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 ENDOD1O94919 500 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 ATP5OP48047 213 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 NDST1P52848 882 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 RBP5P82980 135 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 MMRN1Q13201 1228 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 KRT81Q14533 505 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 AMHR2Q16671 573 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 SLC10A6Q3KNW5 377 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 NPNTQ6UXI9 565 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 PEBP4Q96S96 227 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 PPP1R16BQ96T49 567 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 NCAPGQ9BPX3 1015 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 PDGFCQ9NRA1 345 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 TRIM33Q9UPN9 1127 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 CHKBQ9Y259 395 aa18.73■□□□□ 0.59
CCHCR1-228ENST00000509552 IQANK1A0A1B0GTG1 560 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 C2CD4BA6NLJ0 364 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 ATP11AP98196 1134 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 INCA1Q0VD86 236 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 MTM1Q13496 603 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 LCLAT1Q6UWP7 414 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 IFNLR1Q8IU57 520 aaPredicted RBP18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 MROH8Q9H579 483 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 MCM8Q9UJA3 840 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 ASB14A6NK59 587 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 SPAG6O75602 509 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 MT-ND3P03897 115 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 IBSPP21815 317 aaPredicted RBP18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 OSBPP22059 807 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 ELK3P41970 407 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 PWP2Q15269 919 aaKnown RBP18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 MAP1SQ66K74 1059 aaPredicted RBP18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 FAM183BPQ6ZVS7 135 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 ILDR2Q71H61 639 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 OTOAQ7RTW8 1153 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 BANPQ8N9N5 519 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 TCP10LQ8TDR4 215 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 MZB1Q8WU39 189 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 NT5C1AQ9BXI3 368 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 TSPAN16Q9UKR8 245 aa18.72■□□□□ 0.59
CCHCR1-228ENST00000509552 E5RJQ4 531 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 PIAS1O75925 651 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 TROVE2P10155 538 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 DESP17661 470 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 CCND1P24385 295 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 ADRA1DP25100 572 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 PDK2Q15119 407 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 STILQ15468 1287 aa18.71■□□□□ 0.59
CCHCR1-228ENST00000509552 CDO1Q16878 200 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms