RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SLC46A2Q9BY10 475 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 IMPG2Q9BZV3 1241 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 SMG9Q9H0W8 520 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 GANQ9H2C0 597 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 NDST4Q9H3R1 872 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 LTB4R2Q9NPC1 389 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 ACP6Q9NPH0 428 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 SPATA6Q9NWH7 488 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 EHD2Q9NZN4 543 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 ZMYM5Q9UJ78 669 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 SIK3Q9Y2K2 1263 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 PIAS3Q9Y6X2 628 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 ATP8B3O60423 1300 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 LRRC10BA6NIK2 292 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 TRIM66O15016 1216 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 CHADO15335 359 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 CILPO75339 1184 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 BEST1O76090 585 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 PRAMEF12O95522 483 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 ABL1P00519 1130 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 F11P03951 625 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 DDX6P26196 483 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 HOXD11P31277 338 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 NDST1P52848 882 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 IFRD2Q12894 506 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 ARHGAP29Q52LW3 1261 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 TRIM65Q6PJ69 517 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 DENND5BQ6ZUT9 1274 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 MON1AQ86VX9 555 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 CMTM8Q8IZV2 173 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 SLC4A11Q8NBS3 891 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 B3GALNT2Q8NCR0 500 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 RNF214Q8ND24 703 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 ZMIZ2Q8NF64 920 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 OLIG1Q8TAK6 271 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 BPIFB1Q8TDL5 484 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 TAF4BQ92750 862 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 RSPRY1Q96DX4 576 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 PCED1BQ96HM7 432 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 TNIP3Q96KP6 325 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 NIF3L1Q9GZT8 377 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 RBSNQ9H1K0 784 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 TRPM5Q9NZQ8 1165 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 MTF2Q9Y483 593 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 FHOD1Q9Y613 1164 aa9.28□□□□□ -0.92
PDLIM5-213ENST00000509357 TRAV19A0A0A6YYK7 116 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 LGALS16A8MUM7 142 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 F8VP50 259 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 P4HA2O15460 535 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 LAMTOR5O43504 91 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 STX10O60499 249 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 LETM1O95202 739 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 CKMP06732 381 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 USP17L7P0C7H9 530 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 CCDC130P13994 396 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 CD58P19256 250 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 TARSP26639 723 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 EEF1GP26641 437 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 PBX1P40424 430 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 MAGEA9P43362 315 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 ZNF132P52740 706 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 RAD23BP54727 409 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 FCHO2Q0JRZ9 810 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 CUL2Q13617 745 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 TPD52L1Q16890 204 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 ZNF394Q53GI3 561 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 ACOT1Q86TX2 421 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 C1orf210Q8IVY1 113 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 FUKQ8N0W3 1084 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 TFAP2BQ92481 460 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 TRMT2BQ96GJ1 504 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 SPATA17Q96L03 361 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 DDX23Q9BUQ8 820 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 OSBPL6Q9BZF3 934 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 C8orf33Q9H7E9 229 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 TRPV5Q9NQA5 729 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 CISHQ9NSE2 258 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 TDP1Q9NUW8 608 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 OBP2AQ9NY56 170 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 NCANO14594 1321 aa9.27□□□□□ -0.93
PDLIM5-213ENST00000509357 COL4A3Q01955 1670 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 KIF26AQ9ULI4 1882 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 PIEZO1Q92508 2521 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 A0A1B0GTH6 734 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 GTPBP10A4D1E9 387 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 TULP2O00295 520 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 GFRA3O60609 400 aa9.26□□□□□ -0.93
PDLIM5-213ENST00000509357 TADA3O75528 432 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms