RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 HTRA1Q92743 480 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 FBXW5Q969U6 566 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NRBF2Q96F24 287 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 INTS4Q96HW7 963 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 MAGED4Q96JG8 741 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TMEM237Q96Q45 408 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CGRRF1Q99675 332 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 EVA1BQ9NVM1 165 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 FBXO40Q9UH90 709 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TBX20Q9UMR3 447 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 M0R2N6 131 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 E2F3O00716 465 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 DYNC1I1O14576 645 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SGSM2O43147 1006 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLITRK5O94991 958 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 UQCRFS1P1P0C7P4 283 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CALCBP10092 127 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TPP2P29144 1249 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SYKP43405 635 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CRKLP46109 303 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 EPHB4P54760 987 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PTPN5P54829 565 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 RPS3AP61247 264 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ALDH6A1Q02252 535 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CEP78Q5JTW2 689 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLC10A5Q5PT55 438 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 MORN1Q5T089 497 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NAA35Q5VZE5 725 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 POTEEQ6S8J3 1075 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GALNT5Q7Z7M9 940 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 FAM160B2Q86V87 743 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GHDCQ8N2G8 530 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 BVESQ8NE79 360 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 RIN2Q8WYP3 895 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 DPF1Q92782 380 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SAAL1Q96ER3 474 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TMX3Q96JJ7 454 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CABS1Q96KC9 395 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 FOXP3Q9BZS1 431 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 AGPAT3Q9NRZ7 376 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLC24A2Q9UI40 661 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 EXOC6BQ9Y2D4 811 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ACTL7AQ9Y615 435 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CDK5RAP2Q96SN8 1893 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 LOC102724428A0A0B4J2F2 783 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 POTEFA5A3E0 1075 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CASC3O15234 703 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 AKAP8O43823 692 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RFPL1O75677 317 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 KCNK5O95279 499 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CBX6O95503 412 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 LY86O95711 162 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CKMP06732 381 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CTPS1P17812 591 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PTPRAP18433 802 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 HTR3AP46098 478 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SIK1P57059 783 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RIPK1Q13546 671 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 FSCBQ5H9T9 825 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF772Q68DY9 489 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RINT1Q6NUQ1 792 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ARMC6Q6NXE6 501 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 TAS2R42Q7RTR8 314 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ATG9AQ7Z3C6 839 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 IQUBQ8NA54 791 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 LRRC39Q96DD0 335 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 UROC1Q96N76 676 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 TBC1D10AQ9BXI6 508 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 NAA15Q9BXJ9 866 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 STK33Q9BYT3 514 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 LSG1Q9H089 658 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 QTRT2Q9H974 415 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 IARS2Q9NSE4 1012 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 DNAJC11Q9NVH1 559 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CLDND1Q9NY35 253 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 HERC5Q9UII4 1024 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CHMP2BQ9UQN3 213 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 STXBP5LQ9Y2K9 1186 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 GPR45Q9Y5Y3 372 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 IRS2Q9Y4H2 1338 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CTDSP2O14595 271 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 KCNQ2O43526 872 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 GUCY1B2O75343 617 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 GNRH1P01148 92 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 INHBAP08476 426 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF3P17036 446 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 COL9A1P20849 921 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SUMO3P55854 103 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 TAP1Q03518 808 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PMPCAQ10713 525 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 FGL2Q14314 439 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 POLD3Q15054 466 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 DNAJC10Q8IXB1 793 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC105Q8IYK2 499 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 UBQLNLQ8IYU4 475 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RNF217Q8TC41 542 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RFKQ969G6 155 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 MOGAT1Q96PD6 335 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 EPB41L4BQ9H329 900 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CYP26B1Q9NR63 512 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms