RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 PM20D1Q6GTS8 502 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 TANGO2Q6ICL3 276 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CAVIN1Q6NZI2 390 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 KLHDC10Q6PID8 442 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CLEC20AQ6ZU45 233 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 STKLD1Q8NE28 680 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 STK32AQ8WU08 396 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 KCTD13Q8WZ19 329 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 SHC3Q92529 594 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 IRF7Q92985 503 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 MSANTD3Q96H12 275 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 SHDQ96IW2 340 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 KREMEN1Q96MU8 473 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 NELL2Q99435 816 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 ARID3AQ99856 593 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 TRMT61BQ9BVS5 477 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 KCNH6Q9H252 994 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 UBE2TQ9NPD8 197 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 TDP1Q9NUW8 608 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 FANCLQ9NW38 375 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 TMEM221A6NGB7 291 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 M0R296 226 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 O00370 1275 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 XPO1O14980 1071 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 TADA3O75528 432 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 ASGR2P07307 311 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 USP17L7P0C7H9 530 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 SETSIPP0DME0 302 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 CCDC130P13994 396 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 SLC9A1P19634 815 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 AVPR1AP37288 418 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 GPR15P49685 360 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 CACNA2D1P54289 1103 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 BCAT1P54687 386 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 STARD6P59095 220 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 TAF10Q12962 218 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 TMEM270Q6UE05 265 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 CCDC186Q7Z3E2 898 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 ING5Q8WYH8 240 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 ELMO3Q96BJ8 720 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 HSFY1Q96LI6 401 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 MED10Q9BTT4 135 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 OSBPL6Q9BZF3 934 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 HSD3B7Q9H2F3 369 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 SIX2Q9NPC8 291 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 KRT82Q9NSB4 513 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 THG1LQ9NWX6 298 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
POLR2J3-213ENST00000508848 TRAV19A0A0A6YYK7 116 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 MED7O43513 233 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 BEST1O76090 585 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 CLSTN1O94985 981 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 OAS1P00973 400 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 HDCP19113 662 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 SP100P23497 879 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 PLA2G4AP47712 749 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 ZNF165P49910 485 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 SLC5A3P53794 718 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 MAP3K7CLP57077 242 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 USP46P62068 366 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 GPC5P78333 572 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 BST2Q10589 180 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 IQCB1Q15051 598 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 KRT31Q15323 416 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 ZNF394Q53GI3 561 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 VITQ6UXI7 678 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 C11orf57Q6ZUT1 292 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 DDX42Q86XP3 938 aaKnown RBP eCLIP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 FAM71AQ8IYT1 594 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 ARHGAP18Q8N392 663 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 GPR152Q8TDT2 470 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 ERGIC2Q96RQ1 377 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 CDK5RAP1Q96SZ6 601 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 RPP25Q9BUL9 199 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 SLITRK6Q9H5Y7 841 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 TLR8Q9NR97 1041 aaKnown RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 FAM49BQ9NUQ9 324 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 MAGED2Q9UNF1 606 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 PCDHB4Q9Y5E5 795 aa11.19□□□□□ -0.62
POLR2J3-213ENST00000508848 LGALS16A8MUM7 142 aa11.18□□□□□ -0.62
POLR2J3-213ENST00000508848 ARNTLO00327 626 aa11.18□□□□□ -0.62
POLR2J3-213ENST00000508848 DPYSL4O14531 572 aa11.18□□□□□ -0.62
POLR2J3-213ENST00000508848 GJA1P17302 382 aa11.18□□□□□ -0.62
POLR2J3-213ENST00000508848 LRMPQ12912 555 aa11.18□□□□□ -0.62
POLR2J3-213ENST00000508848 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
POLR2J3-213ENST00000508848 FKBP15Q5T1M5 1219 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms