RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 HASPINQ8TF76 798 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 MR1Q95460 341 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 C1orf159Q96HA4 380 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 HAUS4Q9H6D7 363 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 SOHLH2Q9NX45 425 aa7.9□□□□□ -1.14
PDGFRA-206ENST00000508170 LOC100653049A0A140TA62 436 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 LRRD1A4D1F6 860 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 PMS2P1A4D2B8 440 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 NVLO15381 856 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 TRPA1O75762 1119 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 KRT34O76011 436 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 ZNF445P59923 1031 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 MPP3Q13368 585 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 HNRNPDQ14103 355 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 CNGA2Q16280 664 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 TDRD12Q587J7 1177 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 EMC10Q5UCC4 262 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 GTF2IRD2BQ6EKJ0 949 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 GTF2IRD2Q86UP8 949 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 CELF5Q8N6W0 485 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 RTL3Q8N8U3 475 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 NCSTNQ92542 709 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 PRCCQ92733 491 aaPredicted RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 FAM162AQ96A26 154 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 C19orf60Q96EN9 201 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 HHIPQ96QV1 700 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 CELF4Q9BZC1 486 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 QRSL1Q9H0R6 528 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 C17orf75Q9HAS0 396 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 MBD1Q9UIS9 605 aaPredicted RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 APPL1Q9UKG1 709 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 RPH3AQ9Y2J0 694 aaPredicted RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 HRH3Q9Y5N1 445 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 MYPNQ86TC9 1320 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 TCOF1Q13428 1488 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 MAGI3Q5TCQ9 1506 aa7.9□□□□□ -1.15
PDGFRA-206ENST00000508170 CHURC1-FNTBB4DL54 471 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 ARVCFO00192 962 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 NFKBIEO00221 500 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 CXCL11O14625 94 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 ASNA1O43681 348 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 ENTPD3O75355 529 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 C22orf31O95567 290 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 ITGA5P08648 1049 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 IL12RB1P42701 662 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 POLGP54098 1239 aaPredicted RBP7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 CASP9P55211 416 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 EIF4A1P60842 406 aaKnown RBP7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 PHC1P78364 1004 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 HTRA4P83105 476 aaPredicted RBP7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 TRA2AQ13595 282 aaKnown RBP eCLIP7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 RAB30Q15771 203 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 LETM2Q2VYF4 491 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 KCTD21Q4G0X4 260 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 ARHGAP15Q53QZ3 475 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 MDH1BQ5I0G3 518 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 DEPDC1Q5TB30 811 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 TLK2Q86UE8 772 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 FAM83AQ86UY5 434 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 CCDC105Q8IYK2 499 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 SCYL3Q8IZE3 742 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 RHPN1Q8TCX5 695 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 SYN2Q92777 582 aaPredicted RBP7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 BRF1Q92994 677 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 VCPIP1Q96JH7 1222 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 KCNJ15Q99712 375 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 ZDHHC5Q9C0B5 715 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 KLHL4Q9C0H6 718 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 KLHL3Q9UH77 587 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 SAMM50Q9Y512 469 aa7.89□□□□□ -1.15
PDGFRA-206ENST00000508170 OR6C74A6NCV1 312 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ZNF263O14978 683 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 PIP5K1BO14986 540 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 YKT6O15498 198 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 BRAFP15056 766 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 EDNRBP24530 442 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 GRK5P34947 590 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 WNT5AP41221 380 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 HERVK_113P62684 666 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ERVK-24P63145 666 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 FAM189BP81408 668 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 MRPS15P82914 257 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SMAD3P84022 425 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 PPATQ06203 517 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ZRANB3Q5FWF4 1079 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 PDPK2PQ6A1A2 396 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 OR7E24Q6IFN5 339 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 BORAQ6PGQ7 559 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ATF7IPQ6VMQ6 1270 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ATG14Q6ZNE5 492 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 LUZP1Q86V48 1076 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 MICU3Q86XE3 530 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC22A9Q8IVM8 553 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 DNAJC10Q8IXB1 793 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SYCP3Q8IZU3 236 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms