RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 IL37Q9NZH6 218 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 PYCARDQ9ULZ3 195 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 COLQQ9Y215 455 aaPredicted RBP7.6□□□□□ -1.19
NUP54-204ENST00000506098 PPP2R2CQ9Y2T4 447 aa7.6□□□□□ -1.19
NUP54-204ENST00000506098 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 FAM92AA1XBS5 289 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 EPOPA6NHQ4 379 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 HIDE1A8MVS5 230 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 TMCO5BA8MYB1 307 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ZSCAN12O43309 604 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 LPXNO60711 386 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 MTA2O94776 668 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 PAPLNO95428 1278 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 SEC24AO95486 1093 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 CYP1A2P05177 515 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 IRS1P35568 1242 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 SCNN1AP37088 669 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 TUFMP49411 452 aaKnown RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 CLCN4P51793 760 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 HADHBP55084 474 aaKnown RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 ARPP19P56211 112 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 MAP3K7CLP57077 242 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 RPL10AP62906 217 aaKnown RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 GPC5P78333 572 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ADCY1Q08828 1119 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 DUSP4Q13115 394 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 PRPF38BQ5VTL8 546 aaKnown RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 PLPP4Q5VZY2 271 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 PM20D1Q6GTS8 502 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 PLEKHA7Q6IQ23 1121 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ARCQ7LC44 396 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 PIGZQ86VD9 579 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 XYLT1Q86Y38 959 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ZDHHC17Q8IUH5 632 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 REXO1L1PQ8IX06 675 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 TTC9BQ8N6N2 239 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ATAD1Q8NBU5 361 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 MSANTD4Q8NCY6 345 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 SLC22A17Q8WUG5 538 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ARNTL2Q8WYA1 636 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 C18orf8Q96DM3 657 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 MRPL38Q96DV4 380 aaKnown RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 MCRS1Q96EZ8 462 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 PGLYRP2Q96PD5 576 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 KCNK16Q96T55 309 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 DESI2Q9BSY9 194 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 PACSIN1Q9BY11 444 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 RHOBTB2Q9BYZ6 727 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ZNF576Q9H609 170 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ABI2Q9NYB9 513 aaPredicted RBP7.59□□□□□ -1.19
NUP54-204ENST00000506098 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 ADAM22Q9P0K1 906 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 WDR35Q9P2L0 1181 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 FBXW11Q9UKB1 542 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 MTUS1Q9ULD2 1270 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 STRIP2Q9ULQ0 834 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
NUP54-204ENST00000506098 SIGLEC16A6NMB1 481 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 E5RJQ4 531 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 F8VP50 259 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 CCP110O43303 1012 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 TGM5O43548 720 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 KRT86O43790 486 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 CLASP2O75122 1294 aaKnown RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 FBXO21O94952 628 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 RTN3O95197 1032 aaPredicted RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 ERBB2P04626 1255 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 ATF6P18850 670 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 POU3F3P20264 500 aaPredicted RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 KLRC2P26717 231 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 GRIK1P39086 918 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 ARHGAP25P42331 645 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 RGS7P49802 495 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 KCNC3Q14003 757 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 PPP1R15BQ5SWA1 713 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 LIN9Q5TKA1 542 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 MMS22LQ6ZRQ5 1243 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 KIAA1328Q86T90 577 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 DNAAF5Q86Y56 855 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 RHOT2Q8IXI1 618 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 CCAR2Q8N163 923 aaKnown RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 C3orf20Q8ND61 904 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 GDPD5Q8WTR4 605 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 CTNNBL1Q8WYA6 563 aaPredicted RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 CDCA3Q99618 268 aaPredicted RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 C11orf70Q9BRQ4 267 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 TTLL2Q9BWV7 592 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 TSGA10Q9BZW7 698 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 LACRTQ9GZZ8 138 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 THAP2Q9H0W7 228 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 PLEKHA4Q9H4M7 779 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 CERS4Q9HA82 394 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 LRRC4Q9HBW1 653 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 CNGB3Q9NQW8 809 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 ASNSD1Q9NWL6 643 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 UVRAGQ9P2Y5 699 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 TJP2Q9UDY2 1190 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms