RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 CSNK1G1Q9HCP0 422 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 KRT82Q9NSB4 513 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 CISHQ9NSE2 258 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
KDM3B-203ENST00000505756 FAM49BQ9NUQ9 324 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 TRPM5Q9NZQ8 1165 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 OBSL1O75147 1896 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TRAV19A0A0A6YYK7 116 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 A0A1B0GTH6 734 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 KANSL1LA0AUZ9 987 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 ARNTLO00327 626 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 USP17L7P0C7H9 530 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 FAM200BP0CF97 657 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TBXAS1P24557 533 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 YWHAEP62258 255 aaKnown RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 CUL2Q13617 745 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 ZNF268Q14587 947 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TPRG1Q6ZUI0 275 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 PDZD8Q8NEN9 1154 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 USP13Q92995 863 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TATDN2Q93075 761 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TMEM176AQ96HP8 235 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 LRRC3BQ96PB8 259 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 SLITRK1Q96PX8 696 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 ARID3AQ99856 593 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 TRPC7Q9HCX4 862 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 HEBP1Q9NRV9 189 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 THG1LQ9NWX6 298 aaKnown RBP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 COMMD8Q9NX08 183 aa12.09□□□□□ -0.47
KDM3B-203ENST00000505756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.09□□□□□ -0.47
KDM3B-203ENST00000505756 ZNF318Q5VUA4 2279 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 GREB1Q4ZG55 1949 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 ZNF840PA6NDX5 716 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 KCNJ18B7U540 433 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 TNFRSF10BO14763 440 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 PI15O43692 258 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
KDM3B-203ENST00000505756 CKMP06732 381 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 GLULP15104 373 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 YWHAQP27348 245 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 ADORA2BP29275 332 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 SLC5A3P53794 718 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 MLLT6P55198 1093 aaPredicted RBP12.08□□□□□ -0.48
KDM3B-203ENST00000505756 FANCCQ00597 558 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 KCNH2Q12809 1159 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
KDM3B-203ENST00000505756 TAF10Q12962 218 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 KCNJ12Q14500 433 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 TPD52L1Q16890 204 aaPredicted RBP12.08□□□□□ -0.48
KDM3B-203ENST00000505756 ZNF394Q53GI3 561 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 ZNF852Q6ZMS4 543 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 ZMIZ2Q8NF64 920 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 PRSS33Q8NF86 280 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 PJA1Q8NG27 643 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 CSGALNACT1Q8TDX6 532 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 OVCA2Q8WZ82 227 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 MSANTD3Q96H12 275 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 CNOT6LQ96LI5 555 aaKnown RBP12.08□□□□□ -0.48
KDM3B-203ENST00000505756 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
KDM3B-203ENST00000505756 NT5C1BQ96P26 610 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 PPP1R9BQ96SB3 815 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 SMOQ99835 787 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 OSBPL6Q9BZF3 934 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 PNPLA8Q9NP80 782 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 IL37Q9NZH6 218 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 GCNT4Q9P109 453 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 CCL26Q9Y258 94 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 SIT1Q9Y3P8 196 aa12.08□□□□□ -0.48
KDM3B-203ENST00000505756 DENND4CQ5VZ89 1909 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 FAM92AA1XBS5 289 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 CBFA2T2O43439 604 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
KDM3B-203ENST00000505756 BEST1O76090 585 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 COL4A2P08572 1712 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 HDCP19113 662 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 ZNF75DP51815 510 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 RAD23BP54727 409 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 PTPN5P54829 565 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 MAP3K7CLP57077 242 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 LRMPQ12912 555 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 KRT31Q15323 416 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 PPP1R26Q5T8A7 1209 aaPredicted RBP12.07□□□□□ -0.48
KDM3B-203ENST00000505756 ARHGAP17Q68EM7 881 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 C1orf228Q6PIY5 440 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 CLEC20AQ6ZU45 233 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 CCDC105Q8IYK2 499 aa12.07□□□□□ -0.48
KDM3B-203ENST00000505756 ARL14EPQ8N8R7 260 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms