RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 LNPEPQ9UIQ6 1025 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 H3BQF6 201 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 NUPL2O15504 423 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PQBP1O60828 265 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LINGO3P0C6S8 592 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ALAS1P13196 640 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 XPAP23025 273 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SPAM1P38567 509 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 NLRP11P59045 1033 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 DEFA1P59665 94 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 DEFA3P59666 94 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PRKCZQ05513 592 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SMARCB1Q12824 385 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 GPR176Q14439 515 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 NFE2Q16621 373 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 FAM47CQ5HY64 1035 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 OR6C4Q8NGE1 309 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 OR6B3Q8NGW1 331 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 HTRA1Q92743 480 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PPP1R14AQ96A00 147 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ITPKCQ96DU7 683 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LMAN2LQ9H0V9 348 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ZFYVE1Q9HBF4 777 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CD274Q9NZQ7 290 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LRFN2Q9ULH4 789 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SAR1BQ9Y6B6 198 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ADGBQ8N7X0 1667 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 DAPK1P53355 1430 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ST8SIA5O15466 376 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 HUS1O60921 280 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 N4BP1O75113 896 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 AHSA1O95433 338 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ANXA8P13928 327 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ELF3P78545 371 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ANXA8L1Q5VT79 327 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ULK3Q6PHR2 472 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 TIPARPQ7Z3E1 657 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 AADATQ8N5Z0 425 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 METTL2AQ96IZ6 378 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 FUT8Q9BYC5 575 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 STK33Q9BYT3 514 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ADAM19Q9H013 955 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 INTS2Q9H0H0 1204 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 NDUFAF4Q9P032 175 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 IPO11Q9UI26 975 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ABCA9Q8IUA7 1624 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LOC100506127A0A0U1RQW1 187 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 FAM221BA6H8Z2 402 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RNMTO43148 476 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SLC7A4O43246 635 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PPM1BO75688 479 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ITGA2P17301 1181 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RAB4AP20338 218 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 OGNP20774 298 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ARL3P36405 182 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 MAP2K5Q13163 448 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 HABP2Q14520 560 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 SPA17Q15506 151 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 KNOP1Q1ED39 458 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 MYLK3Q32MK0 819 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CNPY1Q3B7I2 92 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LACTB2Q53H82 288 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 RNASEH2BQ5TBB1 312 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ANKRD26P1Q6NSI1 321 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 POTEAQ6S8J7 498 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF589Q86UQ0 364 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 ADSSL1Q8N142 457 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 C2orf69Q8N8R5 385 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 UPF1Q92900 1129 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■■■□ 21
CLCN3-204ENST00000504131 CDK5RAP1Q96SZ6 601 aaKnown RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 LRRC1Q9BTT6 524 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 KIAA1683Q9H0B3 1180 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 TMEM168Q9H0V1 697 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 CDH19Q9H159 772 aa6.47□□□□□ -1.37
CLCN3-204ENST00000504131 PRG3Q9Y2Y8 225 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-204ENST00000504131 NPC1L1Q9UHC9 1359 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 SNRPAP09012 282 aaKnown RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 NQO1P15559 274 aaKnown RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 HARS2P49590 506 aaKnown RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 HSPA2P54652 639 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 TNFAIP2Q03169 654 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 ZNF177Q13360 481 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 MCMDC2Q4G0Z9 681 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 BEND6Q5SZJ8 279 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 TTC7BQ86TV6 843 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 OSTM1Q86WC4 334 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 GRAMD1CQ8IYS0 662 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 ABTB2Q8N961 1025 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 RBBP8NLQ8NC74 664 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-204ENST00000504131 HUS1BQ8NHY5 278 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 ING5Q8WYH8 240 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 FAF2Q96CS3 445 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 GIMAP5Q96F15 307 aa6.46□□□□□ -1.37
CLCN3-204ENST00000504131 AHCYL2Q96HN2 611 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms