RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 SCN4BQ8IWT1 228 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 HDDC3Q8N4P3 179 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 IQUBQ8NA54 791 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 IL17RCQ8NAC3 791 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 DHX58Q96C10 678 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 PKMYT1Q99640 499 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 CUEDC2Q9H467 287 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
DDR1-250ENST00000503628 BCCIPQ9P287 314 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDR1-250ENST00000503628 AGO2Q9UKV8 859 aaKnown RBP16.9■□□□□ 0.3
DDR1-250ENST00000503628 L1RE1Q9UN81 338 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 ARHGAP26Q9UNA1 814 aa16.9■□□□□ 0.3
DDR1-250ENST00000503628 A0A1W2PQ27 194 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 A0A1W2PQ64 194 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 A0A1W2PQD8 194 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 MYMKA6NI61 221 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 TULP1O00294 542 aaPredicted RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 ZNF131P52739 623 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 GTF2BQ00403 316 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 SOWAHCQ53LP3 525 aaPredicted RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 INTS6LQ5JSJ4 861 aaKnown RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 SPDYCQ5MJ68 293 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 LMBRD2Q68DH5 695 aaPredicted RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 ADGRG2Q8IZP9 1017 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 HMGB4Q8WW32 186 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 ZNF560Q96MR9 790 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 PARVGQ9HBI0 331 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 POLMQ9NP87 494 aaPredicted RBP16.89■□□□□ 0.29
DDR1-250ENST00000503628 ZDHHC4Q9NPG8 344 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 SLC6A14Q9UN76 642 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 GPSM3Q9Y4H4 160 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 IGSF10Q6WRI0 2623 aa16.89■□□□□ 0.29
DDR1-250ENST00000503628 A0A1B0GVL5 298 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 LEFTY2O00292 366 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 CYP17A1P05093 508 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 PFKFB1P16118 471 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 PNPLA4P41247 253 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 DPP6P42658 865 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 MYL7Q01449 175 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 GFPT1Q06210 699 aaPredicted RBP16.88■□□□□ 0.29
DDR1-250ENST00000503628 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
DDR1-250ENST00000503628 DUOXA1Q1HG43 343 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 PEAR1Q5VY43 1037 aaPredicted RBP16.88■□□□□ 0.29
DDR1-250ENST00000503628 SCARA3Q6AZY7 606 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 SLFN12LQ6IEE8 588 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 RAB44Q7Z6P3 723 aaPredicted RBP16.88■□□□□ 0.29
DDR1-250ENST00000503628 FILIP1Q7Z7B0 1213 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 SPATA2LQ8IUW3 424 aaPredicted RBP16.88■□□□□ 0.29
DDR1-250ENST00000503628 PGBD3Q8N328 593 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 DEFB119Q8N690 84 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 FIZ1Q96SL8 496 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 PNKPQ96T60 521 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 TNMDQ9H2S6 317 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 ZHX3Q9H4I2 956 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 MAGEF1Q9HAY2 307 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 AGAP1Q9UPQ3 857 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 HPSEQ9Y251 543 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
DDR1-250ENST00000503628 FAM237AA0A1B0GTK4 181 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 HCRTO43612 131 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 OPHN1O60890 802 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 HUS1O60921 280 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
DDR1-250ENST00000503628 KAT7O95251 611 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
DDR1-250ENST00000503628 SCAPQ12770 1279 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 DHCR24Q15392 516 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 ZNF423Q2M1K9 1284 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 CFAP221Q4G0U5 840 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 EOGTQ5NDL2 527 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 DYMQ7RTS9 669 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 PDZD3Q86UT5 571 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 OSTM1Q86WC4 334 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 OR2I1PQ8NGU4 316 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 CEP76Q8TAP6 659 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 SPATA18Q8TC71 538 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 KBTBD4Q9NVX7 518 aa16.87■□□□□ 0.29
DDR1-250ENST00000503628 SETXQ7Z333 2677 aaKnown RBP16.87■□□□□ 0.29
DDR1-250ENST00000503628 TCRBV21S2A2A0A5A6 115 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 GOLGA6L4A6NEF3 574 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 SCAMP3O14828 347 aaKnown RBP16.86■□□□□ 0.29
DDR1-250ENST00000503628 ADAM23O75077 832 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 IL18RAPO95256 599 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 APODP05090 189 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 ITGB3P05106 788 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 SERPINF2P08697 491 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 CD59P13987 128 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 HOXD12P35452 270 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 KIR2DL1P43626 348 aaPredicted RBP16.86■□□□□ 0.29
DDR1-250ENST00000503628 PDE6CP51160 858 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 WNT7BP56706 349 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 TFAMQ00059 246 aaKnown RBP16.86■□□□□ 0.29
DDR1-250ENST00000503628 AMPD3Q01432 767 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 POU5F1Q01860 360 aaKnown RBP16.86■□□□□ 0.29
DDR1-250ENST00000503628 HSF5Q4G112 596 aaPredicted RBP16.86■□□□□ 0.29
DDR1-250ENST00000503628 C12orf40Q86WS4 652 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms