RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TK1P04183 234 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 LDHCP07864 332 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 HGFP14210 728 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 JUPP14923 745 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 PRKAR1BP31321 381 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 AKT1P31749 480 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 APOBEC3AP31941 199 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 KRT9P35527 623 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 NDUFV1P49821 464 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 PGDP52209 483 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 EIF5P55010 431 aaKnown RBP6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 RNASE9P60153 205 aaKnown RBP6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 HHEXQ03014 270 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 DYRK1AQ13627 763 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 CCNIQ14094 377 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 GRM4Q14833 912 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 CERCAMQ5T4B2 595 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 TCTN3Q6NUS6 607 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 HTR3DQ70Z44 454 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 RRAGAQ7L523 313 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 POLNQ7Z5Q5 900 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 HEATR4Q86WZ0 1026 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 SLC15A3Q8IY34 581 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 CSGALNACT1Q8TDX6 532 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 HIST1H2AAQ96QV6 131 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 DCLRE1CQ96SD1 692 aaKnown RBP6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZSWIM1Q9BR11 485 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 NUDT22Q9BRQ3 303 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 ELAC1Q9H777 363 aaKnown RBP6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 RNF181Q9P0P0 153 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 DAPP1Q9UN19 280 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 PRAMEF33A0A0G2JMD5 474 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 NPEPPSL1A6NEC2 478 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 EFCAB8A8MWE9 144 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 CAPN14A8MX76 684 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 GOLGA6L6A8MZA4 724 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 F5H697 171 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZNF185O15231 689 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 DHHO43323 396 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 PRAMEF10O60809 474 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 CSF1RP07333 972 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 RXRAP19793 462 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 LIFRP42702 1097 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 TUBP50607 506 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 SEC24CP53992 1094 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 OCA2Q04671 838 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 UBE3AQ05086 875 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 SLC12A1Q13621 1099 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 HLXQ14774 488 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 BTBD16Q32M84 506 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZNF648Q5T619 568 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 TTC22Q5TAA0 569 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 ICE2Q659A1 982 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 RGS7BPQ6MZT1 257 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM180BQ6P0A1 224 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 SGMS1Q86VZ5 419 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 MAPKAPK5Q8IW41 473 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 SP8Q8IXZ3 490 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 PCYOX1LQ8NBM8 494 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 MBD3L2Q8NHZ7 208 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 TMEM171Q8WVE6 324 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 HDAC2Q92769 488 aaKnown RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 C3orf49Q96BT1 292 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZBTB45Q96K62 511 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 BRD8Q9H0E9 1235 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 VPS16Q9H269 839 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 FBXO2Q9UK22 296 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 C19orf53Q9UNZ5 99 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 USP22Q9UPT9 525 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 NACADO15069 1562 aa6.05□□□□□ -1.44
HMGB1P3-201ENST00000502802 A0A1W2PS29 197 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM90A18PA6NE21 464 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM90A16PA6NEW6 464 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM90A9PA6NNJ1 464 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 BTBD11A6QL63 1104 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM90A5PA8MXJ8 464 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 TRIAP1O43715 76 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 TAF5LO75529 589 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 HSP90AA1P07900 732 aaKnown RBP6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM90A15PP0C7V4 464 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM90A14PP0C7W9 464 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 CD6P30203 668 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 NTSR1P30989 418 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 UQCRC1P31930 480 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 NPTX2P47972 431 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 GATMP50440 423 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 RPS7P62081 194 aaKnown RBP6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 VAMP2P63027 116 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FPGSQ05932 587 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 MAPK7Q13164 816 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FHL3Q13643 280 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 RPS6KA2Q15349 733 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 DLGAP5Q15398 846 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 PREPLQ4J6C6 727 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 PDCD4Q53EL6 469 aaKnown RBP6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 RBM20Q5T481 1227 aaKnown RBP6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 VPS53Q5VIR6 699 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 SPOCD1Q6ZMY3 1216 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 MICALCLQ6ZW33 695 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 ANKS1BQ7Z6G8 1248 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms