RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PRPSAP2O60256 369 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 TSPAN1O60635 241 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 GBP2P32456 591 aaPredicted RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 RPA3P35244 121 aaPredicted RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 ZC3H12AQ5D1E8 599 aaKnown RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 DARS2Q6PI48 645 aaKnown RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 FAM183BPQ6ZVS7 135 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 MAP7D3Q8IWC1 876 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 ECT2Q9H8V3 914 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 PNMA3Q9UL41 463 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 A0A1B0GUA9 196 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 E5RJQ4 531 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 TYROBPO43914 113 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 TMEM63AO94886 807 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 ZNF286BP0CG31 522 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 CYP3A5P20815 502 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 SSTR1P30872 391 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 NCALDP61601 193 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 CCNA1P78396 465 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 BASP1P80723 227 aaKnown RBP17.32■□□□□ 0.36
VCAN-204ENST00000502527 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 PDK4Q16654 411 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 ZNF792Q3KQV3 632 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 BBS9Q3SYG4 887 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 ADGRD1Q6QNK2 874 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 MAGEC3Q8TD91 643 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 FBF1Q8TES7 1133 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 KIF12Q96FN5 646 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 DHRS4Q9BTZ2 278 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
VCAN-204ENST00000502527 A0A1W2PPM1 405 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 TCRBV7S3A2A0A539 114 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
VCAN-204ENST00000502527 VGLL3A8MV65 326 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 ZWINTO95229 277 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 MMRN1Q13201 1228 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 BOLA3Q53S33 107 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 SH3PXD2AQ5TCZ1 1133 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 MAMDC4Q6UXC1 1216 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 FAM47EQ6ZV65 393 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 TBC1D1Q86TI0 1168 aaPredicted RBP17.31■□□□□ 0.36
VCAN-204ENST00000502527 FITM2Q8N6M3 262 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.31■□□□□ 0.36
VCAN-204ENST00000502527 LRRC8CQ8TDW0 803 aa17.31■□□□□ 0.36
VCAN-204ENST00000502527 GBA2Q9HCG7 927 aaPredicted RBP17.31■□□□□ 0.36
VCAN-204ENST00000502527 GRM5P41594 1212 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 MSH2P43246 934 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 KRT81Q14533 505 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 PDK2Q15119 407 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 CYP4V2Q6ZWL3 525 aaPredicted RBP17.3■□□□□ 0.36
VCAN-204ENST00000502527 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
VCAN-204ENST00000502527 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 PAFAH2Q99487 392 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 WDR83Q9BRX9 315 aaKnown RBP17.3■□□□□ 0.36
VCAN-204ENST00000502527 C16orf70Q9BSU1 422 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 PHTF1Q9UMS5 762 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 MCM3APO60318 1980 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 MGAMO43451 1857 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 H3BRB1 525 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 PIK3R2O00459 728 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 DPYSL4O14531 572 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 PFKMP08237 780 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 CYP2C8P10632 490 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 KRT4P19013 534 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 ADORA2AP29274 412 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 C15orf59Q2T9L4 293 aaPredicted RBP17.3■□□□□ 0.36
VCAN-204ENST00000502527 GOLGA7BQ2TAP0 167 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 TRNP1Q6NT89 227 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 RNF157Q96PX1 679 aa17.3■□□□□ 0.36
VCAN-204ENST00000502527 TUT1Q9H6E5 874 aaKnown RBP17.3■□□□□ 0.36
VCAN-204ENST00000502527 EVPLQ92817 2033 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 ZSWIM8A7E2V4 1837 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 H7C0C1 242 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 NQO1P15559 274 aaKnown RBP17.29■□□□□ 0.36
VCAN-204ENST00000502527 DESP17661 470 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 ATP5OP48047 213 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 EFTUD2Q15029 972 aaKnown RBP eCLIP17.29■□□□□ 0.36
VCAN-204ENST00000502527 SLC1A5Q15758 541 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 NPNTQ6UXI9 565 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 APBB1IPQ7Z5R6 666 aaPredicted RBP17.29■□□□□ 0.36
VCAN-204ENST00000502527 ZNF410Q86VK4 478 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 ZC3H18Q86VM9 953 aaKnown RBP17.29■□□□□ 0.36
VCAN-204ENST00000502527 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 C12orf29Q8N999 325 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
VCAN-204ENST00000502527 TEKT4Q8WW24 435 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 CYTH2Q99418 400 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
VCAN-204ENST00000502527 DERAQ9Y315 318 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms