RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PIK3CBP42338 1070 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 PTDSS1P48651 473 aaKnown RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 CARSP49589 748 aaKnown RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 BCAT1P54687 386 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 MRPS21P82921 87 aaKnown RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 CCNIQ14094 377 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 DAG1Q14118 895 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 NPY5RQ15761 445 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 PTCHD3Q3KNS1 767 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 CCDC181Q5TID7 509 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 CACHD1Q5VU97 1274 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 KSR2Q6VAB6 950 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 UNC13DQ70J99 1090 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 PARS2Q7L3T8 475 aaKnown RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 RD3Q7Z3Z2 195 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 C11orf96Q7Z7L8 435 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 RASAL3Q86YV0 1011 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 IZUMO1Q8IYV9 350 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 LRRC71Q8N4P6 559 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 PJA1Q8NG27 643 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 RP9Q8TA86 221 aaKnown RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 TMEM171Q8WVE6 324 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 XAGE5Q8WWM1 108 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 SOCS4Q8WXH5 440 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 VOPP1Q96AW1 172 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 R3HDM4Q96D70 268 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 SNX22Q96L94 193 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 C17orf80Q9BSJ5 609 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 BRIP1Q9BX63 1249 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 TRIM5Q9C035 493 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 R3HDMLQ9H3Y0 253 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 GBA2Q9HCG7 927 aaPredicted RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 DLL3Q9NYJ7 618 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 DNMT3BQ9UBC3 853 aaKnown RBP3.48□□□□□ -1.85
RIF1-212ENST00000498041 MID2Q9UJV3 735 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 CORO2BQ9UQ03 480 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 SNX14Q9Y5W7 946 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 COX11Q9Y6N1 276 aa3.48□□□□□ -1.85
RIF1-212ENST00000498041 SPATA31A6Q5VVP1 1343 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ARHGEF17Q96PE2 2063 aaPredicted RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 AQP7P3A6NL99 342 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 F8W8V4 182 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 RAB27BO00194 218 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 APAF1O14727 1248 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 CD3EAPO15446 510 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 RRP9O43818 475 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 SRGAP2O75044 1071 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 C1QL1O75973 258 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 PRKCBP05771 671 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ANXA2P07355 339 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 DLDP09622 509 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 SLC5A1P13866 664 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 TPH1P17752 444 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 BTF3P20290 206 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 DRD4P21917 467 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 IL1R2P27930 398 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ITPKBP27987 946 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 EPHA3P29320 983 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 CPT1AP50416 773 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 TPTEP56180 551 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 EEFSECP57772 596 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 IFIT5Q13325 482 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 LY6KQ17RY6 165 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ZNF750Q32MQ0 723 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 TBC1D25Q3MII6 688 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 AARS2Q5JTZ9 985 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 SLC9A4Q6AI14 798 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 FCRL6Q6DN72 434 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 MTHFD1LQ6UB35 978 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 RNF44Q7L0R7 432 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ZNF804AQ7Z570 1209 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 KCTD20Q7Z5Y7 419 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 CAND1Q86VP6 1230 aaKnown RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 DNAJB14Q8TBM8 379 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 SARAFQ96BY9 339 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 RSPRY1Q96DX4 576 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 BBC3Q96PG8 261 aaPredicted RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 DPCDQ9BVM2 203 aaPredicted RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 FAM83DQ9H4H8 585 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 DUSP22Q9NRW4 184 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ARPP21Q9UBL0 812 aaPredicted RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 DKK4Q9UBT3 224 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 ZNF212Q9UDV6 495 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 CCNL1Q9UK58 526 aaPredicted RBP3.47□□□□□ -1.85
RIF1-212ENST00000498041 USP22Q9UPT9 525 aa3.47□□□□□ -1.85
RIF1-212ENST00000498041 WRNQ14191 1432 aaPredicted RBP eCLIP3.46□□□□□ -1.86
RIF1-212ENST00000498041 URB2Q14146 1524 aaKnown RBP3.46□□□□□ -1.86
RIF1-212ENST00000498041 ANO9A1A5B4 782 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 H0YIZ8 118 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 PSMD9O00233 223 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 KPNA5O15131 536 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 PMM2O15305 246 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 THAP12O43422 761 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 PIAS2O75928 621 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 TJP3O95049 919 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 MYL1P05976 194 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 HNRNPCP07910 306 aaKnown RBP eCLIP3.46□□□□□ -1.86
RIF1-212ENST00000498041 PARP1P09874 1014 aaKnown RBP3.46□□□□□ -1.86
RIF1-212ENST00000498041 NPSP0C0P6 89 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 NBPF7P0C2Y1 421 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms