RNA–Protein interactions for RNA: ENST00000497547.1

RRP1-207, Transcript of ribosomal RNA processing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1, Length 3,022 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-207ENST00000497547 VRTNQ9H8Y1 702 aa16.54■□□□□ 0.24
RRP1-207ENST00000497547 GPD1P21695 349 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 IFT88Q13099 833 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 SPRED3Q2MJR0 410 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 C6orf118Q5T5N4 469 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 TRMT10CQ7L0Y3 403 aaKnown RBP16.53■□□□□ 0.24
RRP1-207ENST00000497547 SRRM1Q8IYB3 904 aaKnown RBP16.53■□□□□ 0.24
RRP1-207ENST00000497547 SLC35B2Q8TB61 432 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 DNALI1O14645 258 aaPredicted RBP16.53■□□□□ 0.24
RRP1-207ENST00000497547 RARBP10826 455 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 MMP13P45452 471 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
RRP1-207ENST00000497547 TAP1Q03518 808 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 FNBP1LQ5T0N5 605 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 UBXN11Q5T124 520 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 TWF2Q6IBS0 349 aaKnown RBP16.53■□□□□ 0.24
RRP1-207ENST00000497547 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 FAM172AQ8WUF8 416 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
RRP1-207ENST00000497547 HOMER3Q9NSC5 361 aa16.53■□□□□ 0.24
RRP1-207ENST00000497547 FAM107AO95990 144 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 RPL22P35268 128 aaKnown RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 ZNF143P52747 638 aaPredicted RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 PDIA2Q13087 525 aaKnown RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 TMED2Q15363 201 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 RASAL3Q86YV0 1011 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 TRPV1Q8NER1 839 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 SLC2A14Q8TDB8 520 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 VPS37BQ9H9H4 285 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 DDX56Q9NY93 547 aaKnown RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 DDX20Q9UHI6 824 aaKnown RBP16.52■□□□□ 0.24
RRP1-207ENST00000497547 MFHAS1Q9Y4C4 1052 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
RRP1-207ENST00000497547 MBLAC1A4D2B0 266 aaPredicted RBP16.52■□□□□ 0.23
RRP1-207ENST00000497547 RRN3P2A6NIE6 340 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 AVILO75366 819 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 KRT7P08729 469 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 RBP3P10745 1247 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 GABRB2P47870 512 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 EIF3EP60228 445 aaKnown RBP16.52■□□□□ 0.23
RRP1-207ENST00000497547 PITX1P78337 314 aaPredicted RBP16.52■□□□□ 0.23
RRP1-207ENST00000497547 DCAF4L1Q3SXM0 396 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 OLFML1Q6UWY5 402 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 INTS9Q9NV88 658 aaKnown RBP16.52■□□□□ 0.23
RRP1-207ENST00000497547 GGT7Q9UJ14 662 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 TPX2Q9ULW0 747 aaKnown RBP16.52■□□□□ 0.23
RRP1-207ENST00000497547 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 IPPQ9Y573 584 aa16.52■□□□□ 0.23
RRP1-207ENST00000497547 TMEM120BA0PK00 339 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 SPAG7O75391 227 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 BEST1O76090 585 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 SSTR1P30872 391 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 ADAM17P78536 824 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 BASP1P80723 227 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 PAN2Q504Q3 1202 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 FAM47CQ5HY64 1035 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 FBXO47Q5MNV8 452 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 RNASEH2BQ5TBB1 312 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 PPP1R2P3Q6NXS1 205 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 ALKAL1Q6UXT8 129 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 SYDE1Q6ZW31 735 aaPredicted RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 SMG8Q8ND04 991 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 BEST2Q8NFU1 509 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 RSAD2Q8WXG1 361 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 KPNA7A9QM74 516 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 TNPO2O14787 897 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 TMEM63AO94886 807 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 FSCN1Q16658 493 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 SPDYCQ5MJ68 293 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 ZCCHC9Q8N567 271 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 WDR83Q9BRX9 315 aaKnown RBP16.51■□□□□ 0.23
RRP1-207ENST00000497547 SMIM35A0A1B0GVV1 85 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 CRHR2Q13324 411 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 DPYSL3Q14195 570 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 ERMARDQ5T6L9 678 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 VSTM1Q6UX27 236 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 LRRC34Q8IZ02 419 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 PYROXD2Q8N2H3 581 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 SLC35F5Q8WV83 523 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 CPT1BQ92523 772 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 PAAF1Q9BRP4 392 aa16.51■□□□□ 0.23
RRP1-207ENST00000497547 PRPSAP2O60256 369 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 AGTP01019 485 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 IL4RP24394 825 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 GNL1P36915 607 aaPredicted RBP16.5■□□□□ 0.23
RRP1-207ENST00000497547 NDUFV1P49821 464 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 CAP1Q01518 475 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 PKDCCQ504Y2 493 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 BBS12Q6ZW61 710 aa16.5■□□□□ 0.23
RRP1-207ENST00000497547 TADA2BQ86TJ2 420 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms