RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PARP2Q9UGN5 583 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 CREB1P16220 341 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 CD58P19256 250 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 POLR2BP30876 1174 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 PTPN11Q06124 597 aaPredicted RBP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 ZNF252P-AS1Q0IIN9 211 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 SREBF2Q12772 1141 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 STILQ15468 1287 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 DENND1BQ6P3S1 775 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 HOOK3Q86VS8 718 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 GALNT15Q8N3T1 639 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 KIF2BQ8N4N8 673 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 TMEM176AQ96HP8 235 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 HPDLQ96IR7 371 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 ELOVL4Q9GZR5 314 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 NMRK2Q9NPI5 230 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 TLL2Q9Y6L7 1015 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 CYP2C9P11712 490 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 YY1P25490 414 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 MMP13P45452 471 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 RPL21P46778 160 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 TM4SF4P48230 202 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 CNGA2Q16280 664 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 CLPPQ16740 277 aaPredicted RBP12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 DNAJC24Q6P3W2 148 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 POLNQ7Z5Q5 900 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 PIGWQ7Z7B1 504 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 NSMCE1Q8WV22 266 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 AP5M1Q9H0R1 490 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 GRHL1Q9NZI5 618 aa12.13□□□□□ -0.47
SNRNP200-208ENST00000497539 SIGLEC16A6NMB1 481 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 A8MUI8 341 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 UBOX5O94941 541 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 GHRP10912 638 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 SLC8A1P32418 973 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 KCNJ1P48048 391 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 HIC1Q14526 733 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 WDR72Q3MJ13 1102 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 TRPM8Q7Z2W7 1104 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 LIMS2Q7Z4I7 341 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 RCOR2Q8IZ40 523 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 TCRBV7S2A1N4TA0A589 114 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 EIF4E1BA6NMX2 242 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 O00370 1275 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 NPTXRO95502 500 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 KCNE1P15382 129 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 CRYBB1P53674 252 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 TAS2R40P59535 323 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 ADCY1Q08828 1119 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 ACAP1Q15027 740 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 DRICH1Q6PGQ1 229 aaPredicted RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 SCARA5Q6ZMJ2 495 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 CORO1BQ9BR76 489 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 DDX56Q9NY93 547 aaKnown RBP12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
SNRNP200-208ENST00000497539 DUSP11O75319 330 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 ANP32DO95626 131 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 RPLP2P05387 115 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 KRT19P08727 400 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 GNAT1P11488 350 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 AKR1A1P14550 325 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 CYP3A5P20815 502 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 PTK6Q13882 451 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 CCL14Q16627 93 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 PTPN20Q4JDL3 420 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 LLGL2Q6P1M3 1020 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 ATP11CQ8NB49 1132 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 AGAP11Q8TF27 550 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 NXF1Q9UBU9 619 aaKnown RBP12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 SLC12A4Q9UP95 1085 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 EFR3BQ9Y2G0 817 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 STK38LQ9Y2H1 464 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 NEU2Q9Y3R4 380 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 C17orf102A2RUQ5 167 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 RAP1GAPP47736 663 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 GJA9P57773 515 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 SNX17Q15036 470 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 CCNG2Q16589 344 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 TAZQ16635 292 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 LONRF1Q17RB8 773 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms