RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 MBD3L4A6NDZ8 208 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 MBD3L3A6NE82 208 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 H7C1Q1 480 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 AP4M1O00189 453 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 FRS3O43559 492 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 EXOC3O60645 756 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 PDE8BO95263 885 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 TUBB4AP04350 444 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 MYCLP12524 364 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 ZKSCAN1P17029 563 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 KELP23276 732 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 MPGP29372 298 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 MTX3Q5HYI7 312 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 LRCH2Q5VUJ6 765 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 APOA5Q6Q788 366 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 RAB11FIP4Q86YS3 637 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 SIRT6Q8N6T7 355 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 TERB1Q8NA31 727 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 NMD3Q96D46 503 aaKnown RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 LENG8Q96PV6 779 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 THAP7Q9BT49 309 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 C1QTNF7Q9BXJ2 289 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 TFCP2L1Q9NZI6 479 aa6.54□□□□□ -1.36
MDM2-220ENST00000496959 ZNF70Q9UC06 446 aaPredicted RBP6.54□□□□□ -1.36
MDM2-220ENST00000496959 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 TRIM43BA6NCK2 446 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 PYCARD-AS1I3L0S3 204 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 PPP6CO00743 305 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 RASSF9O75901 435 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 VNN1O95497 513 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 SUMO2P61956 95 aaKnown RBP6.53□□□□□ -1.36
MDM2-220ENST00000496959 E2F1Q01094 437 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 CYP1B1Q16678 543 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 PTCHD3Q3KNS1 767 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 PPP4R4Q6NUP7 873 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 KIRREL2Q6UWL6 708 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 ZDHHC24Q6UX98 284 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 ZNF66Q6ZN08 573 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 NEK8Q86SG6 692 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 CHSY1Q86X52 802 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 MICU3Q86XE3 530 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 OR56A3Q8NH54 315 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 TRIM43Q96BQ3 446 aaPredicted RBP6.53□□□□□ -1.36
MDM2-220ENST00000496959 ZNF778Q96MU6 729 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 ASB2Q96Q27 587 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 SNX18Q96RF0 628 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 LRRC27Q9C0I9 530 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 AFF4Q9UHB7 1163 aaKnown RBP6.53□□□□□ -1.36
MDM2-220ENST00000496959 AMFRQ9UKV5 643 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 USP22Q9UPT9 525 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 CDY1Q9Y6F8 540 aa6.53□□□□□ -1.36
MDM2-220ENST00000496959 SETD1BQ9UPS6 1966 aaKnown RBP6.53□□□□□ -1.36
MDM2-220ENST00000496959 GOLGA6CA6NDK9 693 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 GOLGA6BA6NDN3 693 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 POC1B-GALNT4F8VUJ3 575 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 UBE2Q2LH0YL09 131 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 CCP110O43303 1012 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 RGS10O43665 173 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 GOLGA6DP0CG33 693 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 KLRC1P26715 233 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 BCAT1P54687 386 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 CNGA2Q16280 664 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 CERKLQ49MI3 558 aaPredicted RBP6.52□□□□□ -1.37
MDM2-220ENST00000496959 RNF220Q5VTB9 566 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 CACHD1Q5VU97 1274 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 ZNF626Q68DY1 528 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 SERPINA13PQ6UXR4 307 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 CATSPERGQ6ZRH7 1159 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 C1QL2Q7Z5L3 287 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 SRGAP1Q7Z6B7 1085 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 YTHDF3Q7Z739 585 aaKnown RBP6.52□□□□□ -1.37
MDM2-220ENST00000496959 MYO1HQ8N1T3 1032 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 GALNT4Q8N4A0 578 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 DNAJB14Q8TBM8 379 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 LRTOMTQ8WZ04 291 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 PRR25Q96S07 402 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 CIPCQ9C0C6 399 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 STK32BQ9NY57 414 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 GOLGA6AQ9NYA3 693 aa6.52□□□□□ -1.37
MDM2-220ENST00000496959 TSPAN6O43657 245 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 SRGAP2O75044 1071 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 RASAL1O95294 804 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 EPHA3P29320 983 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 GKP32189 559 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 MTHFSP49914 203 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 SSBP2P81877 361 aaPredicted RBP6.51□□□□□ -1.37
MDM2-220ENST00000496959 CEP78Q5JTW2 689 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 FCRL6Q6DN72 434 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 SLC18B1Q6NT16 456 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 DARS2Q6PI48 645 aaKnown RBP6.51□□□□□ -1.37
MDM2-220ENST00000496959 DPY19L3Q6ZPD9 716 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 CCDC149Q6ZUS6 474 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 ANKRD13AQ8IZ07 590 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 SMCR8Q8TEV9 937 aaPredicted RBP6.51□□□□□ -1.37
MDM2-220ENST00000496959 STK31Q9BXU1 1019 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 TRIM5Q9C035 493 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 HDAC9Q9UKV0 1011 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 OGDHLQ9ULD0 1010 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 G3BP2Q9UN86 482 aaKnown RBP6.51□□□□□ -1.37
MDM2-220ENST00000496959 DRG1Q9Y295 367 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms