RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 LEFTY2O00292 366 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 SCAMP3O14828 347 aaKnown RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 OLFM2O95897 454 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 OAS1P00973 400 aaKnown RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 CCDC130P13994 396 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 TCF3P15923 654 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 GCLMP48507 274 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 NDST1P52848 882 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 NRLP54845 237 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 PPP3CAQ08209 521 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK4-206ENST00000496822 SRSF5Q13243 272 aaKnown RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 HEATR6Q6AI08 1181 aaKnown RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 FAM186BQ8IYM0 893 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 FUKQ8N0W3 1084 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 SCAMP5Q8TAC9 235 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 EZH1Q92800 747 aaPredicted RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 ATP2A3Q93084 1043 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 MED10Q9BTT4 135 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 APOBEC3GQ9HC16 384 aaKnown RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 KRT82Q9NSB4 513 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 POLR3BQ9NW08 1133 aaPredicted RBP16.03■□□□□ 0.16
NEK4-206ENST00000496822 SMPD4Q9NXE4 827 aa16.03■□□□□ 0.16
NEK4-206ENST00000496822 TNFRSF10BO14763 440 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 IKBKBO14920 756 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 MAPK13O15264 365 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 KIF20AO95235 890 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 ABL1P00519 1130 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 GALK1P51570 392 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 SLC5A3P53794 718 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 PNOCQ13519 176 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 SGSM1Q2NKQ1 1148 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
NEK4-206ENST00000496822 NUP93Q8N1F7 819 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 SYNPOQ8N3V7 929 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 ZMIZ2Q8NF64 920 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 TAS1R2Q8TE23 839 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 TAF4BQ92750 862 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 FBXO32Q969P5 355 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 EEF2KMTQ96G04 330 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 TNIP3Q96KP6 325 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 P2RY13Q9BPV8 354 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 MMRN2Q9H8L6 949 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 DMAP1Q9NPF5 467 aaPredicted RBP16.02■□□□□ 0.16
NEK4-206ENST00000496822 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 EHD2Q9NZN4 543 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 CPQQ9Y646 472 aa16.02■□□□□ 0.16
NEK4-206ENST00000496822 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 HRO43593 1189 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 RNF40O75150 1001 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 AP1G2O75843 785 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 BEST1O76090 585 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 P4HA1P13674 534 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 PFKLP17858 780 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 YWHAQP27348 245 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 ID4P47928 161 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 PDE6CP51160 858 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 SLC7A9P82251 487 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 INTS8Q75QN2 995 aaKnown RBP16.01■□□□□ 0.15
NEK4-206ENST00000496822 C12orf29Q8N999 325 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 SLC2A14Q8TDB8 520 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
NEK4-206ENST00000496822 RMDN1Q96DB5 314 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 SMARCD1Q96GM5 515 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 SLITRK1Q96PX8 696 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 SMOQ99835 787 aa16.01■□□□□ 0.15
NEK4-206ENST00000496822 RTN3O95197 1032 aaPredicted RBP16■□□□□ 0.15
NEK4-206ENST00000496822 KRT13P13646 458 aa16■□□□□ 0.15
NEK4-206ENST00000496822 PSMC2P35998 433 aaKnown RBP16■□□□□ 0.15
NEK4-206ENST00000496822 PPP3CCP48454 512 aa16■□□□□ 0.15
NEK4-206ENST00000496822 PXNP49023 591 aaPredicted RBP16■□□□□ 0.15
NEK4-206ENST00000496822 PGFP49763 221 aa16■□□□□ 0.15
NEK4-206ENST00000496822 ADAM9Q13443 819 aa16■□□□□ 0.15
NEK4-206ENST00000496822 GAB4Q2WGN9 574 aa16■□□□□ 0.15
NEK4-206ENST00000496822 PRR23BQ6ZRT6 265 aa16■□□□□ 0.15
NEK4-206ENST00000496822 FILIP1Q7Z7B0 1213 aa16■□□□□ 0.15
NEK4-206ENST00000496822 LONP2Q86WA8 852 aa16■□□□□ 0.15
NEK4-206ENST00000496822 CRYBG2Q8N1P7 616 aa16■□□□□ 0.15
NEK4-206ENST00000496822 CD101Q93033 1021 aa16■□□□□ 0.15
NEK4-206ENST00000496822 PARD6AQ9NPB6 346 aa16■□□□□ 0.15
NEK4-206ENST00000496822 GMIPQ9P107 970 aa16■□□□□ 0.15
NEK4-206ENST00000496822 ANTXRLA6NF34 631 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 COCHO43405 550 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 NFATC1O95644 943 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 CYP17A1P05093 508 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 MBL2P11226 248 aaPredicted RBP15.99■□□□□ 0.15
NEK4-206ENST00000496822 DRD1P21728 446 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 RPL13P26373 211 aaKnown RBP15.99■□□□□ 0.15
NEK4-206ENST00000496822 ADORA2BP29275 332 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 MAP3K7CLP57077 242 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 AMPD2Q01433 879 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 INCA1Q0VD86 236 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 GPRIN1Q7Z2K8 1008 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 UNC93AQ86WB7 457 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 PDZD8Q8NEN9 1154 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 ENGASEQ8NFI3 743 aa15.99■□□□□ 0.15
NEK4-206ENST00000496822 ZFRQ96KR1 1074 aaKnown RBP15.99■□□□□ 0.15
NEK4-206ENST00000496822 NIF3L1Q9GZT8 377 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms