RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 RSPO2Q6UXX9 243 aaPredicted RBP17.74■□□□□ 0.43
LMNA-216ENST00000496738 UBL4BQ8N7F7 174 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.74■□□□□ 0.43
LMNA-216ENST00000496738 LRRC4Q9HBW1 653 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 CTNNA1P35221 906 aaKnown RBP17.74■□□□□ 0.43
LMNA-216ENST00000496738 TKTL1P51854 596 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
LMNA-216ENST00000496738 CMTR2Q8IYT2 770 aaKnown RBP17.74■□□□□ 0.43
LMNA-216ENST00000496738 CEP112Q8N8E3 955 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 STKLD1Q8NE28 680 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 HSFY1Q96LI6 401 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 ZNF558Q96NG5 402 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 ZBED2Q9BTP6 218 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 TTPALQ9BTX7 342 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 NLRC5Q86WI3 1866 aa17.74■□□□□ 0.43
LMNA-216ENST00000496738 MIF4GDA9UHW6 222 aaKnown RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 ACADSBP45954 432 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 C2orf54Q08AI8 447 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 LLGL1Q15334 1064 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 MAPRE1Q15691 268 aaKnown RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 RAB6CQ53S08 254 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 SIX6OS1Q8N1H7 587 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 MYCBPQ99417 103 aaPredicted RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 RAB6CQ9H0N0 254 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 KLHL11Q9NVR0 708 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 TMEM59LQ9UK28 342 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 CPB1P15086 417 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 RPL17P18621 184 aaKnown RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 SLC1A1P43005 524 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 RPL34P49207 117 aaKnown RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 PEX5P50542 639 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 SNX16P57768 344 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 IFRD2Q12894 506 aaPredicted RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 MRPL58Q14197 206 aaKnown RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 CDO1Q16878 200 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 C15orf59Q2T9L4 293 aaPredicted RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 SH3PXD2AQ5TCZ1 1133 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 CC2D1AQ6P1N0 951 aaPredicted RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 DCP1BQ8IZD4 617 aaKnown RBP17.73■□□□□ 0.43
LMNA-216ENST00000496738 COLGALT1Q8NBJ5 622 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 RXFP2Q8WXD0 754 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 DPF3Q92784 378 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 KHSRPQ92945 711 aaKnown RBP eCLIP17.73■□□□□ 0.43
LMNA-216ENST00000496738 CFAP57Q96MR6 1250 aa17.73■□□□□ 0.43
LMNA-216ENST00000496738 CTAGE15A4D2H0 777 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 CTAGE8P0CG41 777 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 GRIK1P39086 918 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 CKAP4Q07065 602 aaKnown RBP17.72■□□□□ 0.43
LMNA-216ENST00000496738 TEX35Q5T0J7 233 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 C4orf50Q6ZRC1 276 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 CTAGE6Q86UF2 777 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 SCN4BQ8IWT1 228 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 CTAGE4Q8IX94 777 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 TTC9BQ8N6N2 239 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 RIN2Q8WYP3 895 aaPredicted RBP17.72■□□□□ 0.43
LMNA-216ENST00000496738 ACSF2Q96CM8 615 aaPredicted RBP17.72■□□□□ 0.43
LMNA-216ENST00000496738 ULBP1Q9BZM6 244 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
LMNA-216ENST00000496738 PCDHA3Q9Y5H8 950 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 HHLA1C9JL84 531 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 GJB5O95377 273 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 PDGFRAP16234 1089 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 GPD1P21695 349 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 CTNNA2P26232 953 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 GPR15P49685 360 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 ATP11AP98196 1134 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 ADCY1Q08828 1119 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 PIGHQ14442 188 aaPredicted RBP17.72■□□□□ 0.43
LMNA-216ENST00000496738 SDHAF4Q5VUM1 108 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 PSRC1Q6PGN9 363 aaPredicted RBP17.72■□□□□ 0.43
LMNA-216ENST00000496738 SLC39A11Q8N1S5 342 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 KCTD13Q8WZ19 329 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 FAM149B1Q96BN6 582 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 PBKQ96KB5 322 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 CSNK1G1Q9HCP0 422 aa17.72■□□□□ 0.43
LMNA-216ENST00000496738 C2CD4BA6NLJ0 364 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 TADA3O75528 432 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 USP17L7P0C7H9 530 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 PYGMP11217 842 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 PAFAH1B1P43034 410 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 CFAP221Q4G0U5 840 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 ATP13A4Q4VNC1 1196 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 ADAT2Q7Z6V5 191 aaKnown RBP17.71■□□□□ 0.43
LMNA-216ENST00000496738 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 ATAD1Q8NBU5 361 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 TMEM169Q96HH4 297 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 RNPC3Q96LT9 517 aaKnown RBP17.71■□□□□ 0.43
LMNA-216ENST00000496738 NCAPGQ9BPX3 1015 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 CDY1Q9Y6F8 540 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 ADAM12O43184 909 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 SOAT2O75908 522 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 LAG3P18627 525 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 MAN1A1P33908 653 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 USP41Q3LFD5 358 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 KIAA1841Q6NSI8 718 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 ZDHHC17Q8IUH5 632 aa17.71■□□□□ 0.43
LMNA-216ENST00000496738 NOA1Q8NC60 698 aaKnown RBP17.71■□□□□ 0.43
LMNA-216ENST00000496738 CYLDQ9NQC7 956 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms