RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ACTL7BQ9Y614 415 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ALOX15BO15296 676 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ZNF865P0CJ78 1059 aaPredicted RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 BRAFP15056 766 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 DESP17661 470 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 IFNAR2P48551 515 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 SLC6A3Q01959 620 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 TFDP2Q14188 446 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 DPYSL3Q14195 570 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 SNX17Q15036 470 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 NOMO1Q15155 1222 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 TMED2Q15363 201 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 HIF1AQ16665 826 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 CCDC14Q49A88 953 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 FAM47CQ5HY64 1035 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ARHGAP17Q68EM7 881 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 CYP4X1Q8N118 509 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 OR6B3Q8NGW1 331 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 DYDC1Q8WWB3 177 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 DNAJB3Q8WWF6 145 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 CPT1BQ92523 772 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 MAK16Q9BXY0 300 aaKnown RBP13.65□□□□□ -0.22
GARNL3-220ENST00000496711 C10orf88Q9H8K7 445 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 FLRT1Q9NZU1 646 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 TBK1Q9UHD2 729 aa13.65□□□□□ -0.22
GARNL3-220ENST00000496711 SMAPO00193 183 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 HAS3O00219 553 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 XPOTO43592 962 aaKnown RBP13.64□□□□□ -0.23
GARNL3-220ENST00000496711 ECM2O94769 699 aaPredicted RBP13.64□□□□□ -0.23
GARNL3-220ENST00000496711 CD4P01730 458 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 RBP3P10745 1247 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 CREB1P16220 341 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 SDC4P31431 198 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 RPL22P35268 128 aaKnown RBP13.64□□□□□ -0.23
GARNL3-220ENST00000496711 LIG3P49916 1009 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 CPT1AP50416 773 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 ARL4CP56559 192 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 ADAM17P78536 824 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 ROR1Q01973 937 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 NR1H3Q13133 447 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 HIC1Q14526 733 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 KRT81Q14533 505 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 PDK2Q15119 407 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 SOWAHAQ2M3V2 549 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 RAB6CQ53S08 254 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 RNF187Q5TA31 235 aaPredicted RBP13.64□□□□□ -0.23
GARNL3-220ENST00000496711 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 TDRPQ86YL5 185 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 CCDC13Q8IYE1 715 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 NAT8LQ8N9F0 302 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 STK32AQ8WU08 396 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 SLC35F5Q8WV83 523 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 TEKT4Q8WW24 435 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 TMEM40Q8WWA1 233 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 USP6NLQ92738 828 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 RAB6CQ9H0N0 254 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 VPS37BQ9H9H4 285 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 GJD2Q9UKL4 321 aa13.64□□□□□ -0.23
GARNL3-220ENST00000496711 A8MXQ7 604 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 MYL3P08590 195 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 AKAP5P24588 427 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 PNPLA4P41247 253 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 ATP11AP98196 1134 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 MAP7D3Q8IWC1 876 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 UNC45BQ8IWX7 931 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 SRRM1Q8IYB3 904 aaKnown RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 MGARPQ8TDB4 240 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 FAM172AQ8WUF8 416 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 TBCBQ99426 244 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 DPEP3Q9H4B8 488 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 PPCSQ9HAB8 311 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 KCNK9Q9NPC2 374 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 FOXO6A8MYZ6 492 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 GOLGA8MH3BSY2 632 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 PIRO00625 290 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 PAPSS1O43252 624 aaPredicted RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 TREHO43280 583 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 CPP00450 1065 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 VIMP08670 466 aaKnown RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 GCAP28676 217 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 BCAT1P54687 386 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 BST2Q10589 180 aaKnown RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 LRRC14Q15048 493 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 BOLA3Q53S33 107 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
GARNL3-220ENST00000496711 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 CCDC121Q6ZUS5 278 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 VSIG1Q86XK7 387 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms