RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 ATP2A3Q93084 1043 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 OTUB2Q96DC9 234 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 EEF2KMTQ96G04 330 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 TRIM62Q9BVG3 475 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 SLC46A2Q9BY10 475 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 DUSP16Q9BY84 665 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 B3GNT5Q9BYG0 378 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 NACA2Q9H009 215 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 TBC1D17Q9HA65 648 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 TMEM51Q9NW97 253 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 IL37Q9NZH6 218 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 TBC1D14Q9P2M4 693 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 ARHGAP26Q9UNA1 814 aa8.04□□□□□ -1.12
CDHR3-214ENST00000496633 ZNF840PA6NDX5 716 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SART1O43290 800 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 GALR2O43603 387 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 NFATC1O95644 943 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 RALAP11233 206 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CD58P19256 250 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 MTIF2P46199 727 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 RAP1GAPP47736 663 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 IFNAR2P48551 515 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SLC5A3P53794 718 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 BCAT1P54687 386 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 STX17P56962 302 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 BPIFB4P59827 614 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SLC7A9P82251 487 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 TAF10Q12962 218 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 PDAP1Q13442 181 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 MAN2A1Q16706 1144 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 EXOC3L4Q17RC7 722 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 ITPRIPL2Q3MIP1 535 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CBWD6Q4V339 395 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CBWD3Q5JTY5 395 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 DGKKQ5KSL6 1271 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CBWD5Q5RIA9 395 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 HECTD3Q5T447 861 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SPOPLQ6IQ16 392 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 ZC3H14Q6PJT7 736 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 MAMSTRQ6ZN01 415 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 RBM43Q6ZSC3 357 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CREBRFQ8IUR6 639 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 FMNL3Q8IVF7 1028 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 TMEM130Q8N3G9 435 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 PJA1Q8NG27 643 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 ENOX1Q8TC92 643 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 GOLGA1Q92805 767 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 FBXO32Q969P5 355 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CNOT6LQ96LI5 555 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 ZSWIM3Q96MP5 696 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 DDX23Q9BUQ8 820 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 FAM126AQ9BYI3 521 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 ZNF518BQ9C0D4 1074 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SDCBP2Q9H190 292 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SEMA4AQ9H3S1 761 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 DPEP3Q9H4B8 488 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 APOBEC3GQ9HC16 384 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CLIC5Q9NZA1 410 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 LSM7Q9UK45 103 aaKnown RBP8.03□□□□□ -1.12
CDHR3-214ENST00000496633 CA14Q9ULX7 337 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 SCML2Q9UQR0 700 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 PTPRDP23468 1912 aa8.03□□□□□ -1.12
CDHR3-214ENST00000496633 DOCK6Q96HP0 2047 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 DENND4CQ5VZ89 1909 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 ZDBF2Q9HCK1 2354 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 E2F8A0AVK6 867 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 TNFRSF10BO14763 440 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 XPO1O14980 1071 aaKnown RBP8.02□□□□□ -1.13
CDHR3-214ENST00000496633 NARSO43776 548 aaKnown RBP8.02□□□□□ -1.13
CDHR3-214ENST00000496633 ATG13O75143 517 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 CAVIN2O95810 425 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 OLFM2O95897 454 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 ABL1P00519 1130 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 PYGBP11216 843 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 GJA1P17302 382 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 ATP5C1P36542 298 aaKnown RBP8.02□□□□□ -1.13
CDHR3-214ENST00000496633 VIPR2P41587 438 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 RAD23BP54727 409 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 MAP3K7CLP57077 242 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 CYP4F8P98187 520 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 BST2Q10589 180 aaKnown RBP8.02□□□□□ -1.13
CDHR3-214ENST00000496633 MTA1Q13330 715 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 MTF1Q14872 753 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 CNGA2Q16280 664 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 STX1AQ16623 288 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 FBXO43Q4G163 708 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 TXNDC8Q6A555 127 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 CLEC20AQ6ZU45 233 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 TPRG1Q6ZUI0 275 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 CCDC186Q7Z3E2 898 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 TMEM150AQ86TG1 271 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 CCDC105Q8IYK2 499 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 SCML4Q8N228 414 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 OSCP1Q8WVF1 389 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 FAM3CQ92520 227 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 SEMA4DQ92854 862 aa8.02□□□□□ -1.13
CDHR3-214ENST00000496633 USP13Q92995 863 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-214ENST00000496633 FAM122AQ96E09 287 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms