RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-225	ENST00000495471	MAEA	Q7L5Y9	396 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	CNGA4	Q8IV77	575 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	GALNT4	Q8N4A0	578 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	OR56A3	Q8NH54	315 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	DENND1A	Q8TEH3	1009 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	PRSS22	Q9GZN4	317 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	STK32B	Q9NY57	414 aa		4.82	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZNF521	Q96K83	1311 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	TCRBV5S1A1T	A0A578	114 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	PRPF3	O43395	683 aa	Known RBP	4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	CYP2A6	P11509	494 aa	Predicted RBP	4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	PTGER1	P34995	402 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	DAZAP2	Q15038	168 aa	Predicted RBP	4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	LCE1A	Q5T7P2	110 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	SERPINA13P	Q6UXR4	307 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	MICU3	Q86XE3	530 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	C9orf106	Q8NAJ2	232 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	DNAJB14	Q8TBM8	379 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	RSPRY1	Q96DX4	576 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	MMS19	Q96T76	1030 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	C22orf23	Q9BZE7	217 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZNF518B	Q9C0D4	1074 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	SPRTN	Q9H040	489 aa	Predicted RBP	4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZSCAN32	Q9NX65	697 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	ASIC5	Q9NY37	505 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	KLHL13	Q9P2N7	655 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	AMFR	Q9UKV5	643 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	NOB1	Q9ULX3	412 aa	Known RBP	4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	CDY1	Q9Y6F8	540 aa		4.81	□□□□□ -1.64
CCNL1-225	ENST00000495471	WDR17	Q8IZU2	1322 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	CYP2D7	A0A087X1C5	515 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	CAPN8	A6NHC0	703 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	BCAR3	O75815	825 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	USP1	O94782	785 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	CHRM5	P08912	532 aa	Predicted RBP	4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	MYCL	P12524	364 aa	Predicted RBP	4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	ITGB6	P18564	788 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	GK	P32189	559 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	BCAT1	P54687	386 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	CCNI	Q14094	377 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	CERKL	Q49MI3	558 aa	Predicted RBP	4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	MIS18BP1	Q6P0N0	1132 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	KIAA0319L	Q8IZA0	1049 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	SPART	Q8N0X7	666 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	SIRT6	Q8N6T7	355 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	FCRL4	Q96PJ5	515 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	TMEM60	Q9H2L4	133 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	WDR26	Q9H7D7	661 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	LPAR3	Q9UBY5	353 aa		4.8	□□□□□ -1.64
CCNL1-225	ENST00000495471	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	UBE2Q2L	H0YL09	131 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	CES2	O00748	559 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	SRGAP2	O75044	1071 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	PMPCB	O75439	489 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	FGA	P02671	866 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	SUMO3	P55854	103 aa	Predicted RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	LRRC41	Q15345	812 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	PLEKHG6	Q3KR16	790 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	ODR4	Q5SWX8	454 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	CXorf57	Q6NSI4	855 aa	Known RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	APOA5	Q6Q788	366 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	KCTD20	Q7Z5Y7	419 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	SFTPA1	Q8IWL2	248 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	SPSB4	Q96A44	273 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZBTB9	Q96C00	473 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	ZC3H10	Q96K80	434 aa	Known RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	PPP1R9B	Q96SB3	815 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	VPS16	Q9H269	839 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	A1CF	Q9NQ94	594 aa	Known RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	XPNPEP3	Q9NQH7	507 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	SACM1L	Q9NTJ5	587 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	DNMT3B	Q9UBC3	853 aa	Known RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	CPNE7	Q9UBL6	633 aa		4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	DRG1	Q9Y295	367 aa	Known RBP	4.79	□□□□□ -1.64
CCNL1-225	ENST00000495471	TRIM43B	A6NCK2	446 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471		A6NNZ2	444 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	FAM227A	F5H4B4	570 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	PSMD9	O00233	223 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	PPEF2	O14830	753 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	SCGB1D2	O95969	90 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	IGKV2-30	P06310	120 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	MMP13	P45452	471 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	CNN3	Q15417	329 aa	Known RBP	4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	FAM187B	Q17R55	369 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471		Q4G0T1	1027 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	CACHD1	Q5VU97	1274 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	SUCLG2	Q96I99	432 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	TRIM5	Q9C035	493 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	TUBA8	Q9NY65	449 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	ELOVL5	Q9NYP7	299 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	TFCP2L1	Q9NZI6	479 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	L1RE1	Q9UN81	338 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	SCAF8	Q9UPN6	1271 aa	Known RBP	4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	PAXBP1	Q9Y5B6	917 aa		4.78	□□□□□ -1.64
CCNL1-225	ENST00000495471	LOC102723971	A0A1B0GUV8	181 aa		4.77	□□□□□ -1.65
CCNL1-225	ENST00000495471	CFAP69	A5D8W1	941 aa		4.77	□□□□□ -1.65
CCNL1-225	ENST00000495471	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.77	□□□□□ -1.65
CCNL1-225	ENST00000495471	MBD3L3	A6NE82	208 aa	Predicted RBP	4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms