RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 DPP3Q9NY33 737 aa12.57□□□□□ -0.4
CSNK1E-212ENST00000494610 CCDC163A0A0D9SF12 145 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 BCLAF3A2AJT9 711 aaKnown RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 C2orf78A6NCI8 922 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 CDX4O14627 284 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 ATG13O75143 517 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 TPM3P06753 285 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 TPM2P07951 284 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 HNRNPLP14866 589 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 RPL13P26373 211 aaKnown RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 ZXDBP98169 803 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 IQCB1Q15051 598 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 KNOP1Q1ED39 458 aaKnown RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 CRELD2Q6UXH1 353 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 TTC30AQ86WT1 665 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 SMYD4Q8IYR2 804 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 ZNF507Q8TCN5 953 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 TBC1D7Q9P0N9 293 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 MAGEC2Q9UBF1 373 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 PCDHGA5Q9Y5G8 931 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 PTPRDP23468 1912 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
CSNK1E-212ENST00000494610 PDXKO00764 312 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 PPP1R37O75864 691 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 PIGRP01833 764 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 DRD1P21728 446 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 TAF6P49848 677 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 IRX4P78413 519 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 GTF2BQ00403 316 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 MTF1Q14872 753 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 ZNF77Q15935 545 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 NFIL3Q16649 462 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 EML3Q32P44 896 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 UAP1L1Q3KQV9 507 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 ANO7Q6IWH7 933 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 ARMCX6Q7L4S7 300 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 SYT13Q7L8C5 426 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 LUZP1Q86V48 1076 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 METTL23Q86XA0 190 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 DHX40Q8IX18 779 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 SYCP3Q8IZU3 236 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 CCDC33Q8N5R6 958 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 CAMKK1Q8N5S9 505 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 ARL14EPQ8N8R7 260 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 RLN3Q8WXF3 142 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 CEP63Q96MT8 703 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 RBSNQ9H1K0 784 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 THAP9Q9H5L6 903 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 DUS2Q9NX74 493 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 NFE2L3Q9Y4A8 694 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 MYOFQ9NZM1 2061 aa12.55□□□□□ -0.4
CSNK1E-212ENST00000494610 ADAMTS9Q9P2N4 1935 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 KPNA7A9QM74 516 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 K7EQS6 105 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 KIAA0391O15091 583 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 AKAP3O75969 853 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 APBB3O95704 486 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 GNA14O95837 355 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 ADSSP30520 456 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 KCNA1Q09470 495 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 ELF2Q15723 593 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 CC2D1AQ6P1N0 951 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 CSGALNACT2Q8N6G5 542 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 SPPL2BQ8TCT7 592 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 OSCP1Q8WVF1 389 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 MRPS31Q92665 395 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 CD101Q93033 1021 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 SCNM1Q9BWG6 230 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
CSNK1E-212ENST00000494610 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 CETN3O15182 167 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 ATP2C2O75185 946 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 RHOBTB1O94844 696 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms